Non-Coding RNA Search

Pig3-SRG8004G13

Sequence:


               
               AGGGTAAACAGGGCAGCGAGGGGACAAAGTCCGCTGGGCGACTGTAATATAGTGTGAGAG
GTGCCACAATGGGAGAAGGATTCAATGTCCTAGGAGTAGCCTGGAGAAGTGTTACCAAAT
ACTTAGGAATAAGCGAAAGCTTCTAAGAGCTTGTCATCTAGCAATTTCAAGAACCCTTAA
TCAATAACTATATTGAAGGTTATAGTATTACTATTTCTCATCCTATTTACCTCAAAGCTA
TGGTTTTCAACCTTTTTTCATCATTACCCCCTTAAGGAGGAACCTTTTCTGGATAGTGTT
TCTTAATCATCATCCCCTCTTCCCAATAAAATTTTATACCACGAGCCTACTGTGCAGCTA
TGCTTTCTATGTGAAAAGAGGAATTTTTTTTGTCCTCTAAGAACAAATTTTTGCCCCATT
GGGAGTGAAATGGCCCCCACTGAAAATGCATGGGTTAAACTATTTAAGATAGATCACAGG
ACCAAGTTTTGCAGAAAATGCAGTTGCTACATCTTTGTAGTACTTGCTCTTTAAATGTCA
AATGGACTAGGTACTGTTTTTAAAAAAAAAAAAATTGGGGGAGTTCCCTGGTGACCTAGG
CCAGTAAGGACTCAGCGTTGTCATGGCTGTGGCTTGCGTGCCTACTGTGGCATGGATTTG
ATGCCTGGCGCAGGAACTTTTGCATGCTGCAGGCATAACCAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGGTAAACAGGGCAGCGAGGGGACAAAGTCCGCTGGGCGACTGTAATATAGTGTGAGAG
GTGCCACAATGGGAGAAGGATTCAATGTCCTAGGAGTAGCCTGGAGAAGTGTTACCAAAT
ACTTAGGAATAAGCGAAAGCTTCTAAGAGCTTGTCATCTAGCAATTTCAAGAACCCTTAA
TCAATAACTATATTGAAGGTTATAGTATTACTATTTCTCATCCTATTTACCTCAAAGCTA
TGGTTTTCAACCTTTTTTCATCATTACCCCCTTAAGGAGGAACCTTTTCTGGATAGTGTT
TCTTAATCATCATCCCCTCTTCCCAATAAAATTTTATACCACGAGCCTACTGTGCAGCTA
TGCTTTCTATGTGAAAAGAGGAATTTTTTTTGTCCTCTAAGAACAAATTTTTGCCCCATT
GGGAGTGAAATGGCCCCCACTGAAAATGCATGGGTTAAACTATTTAAGATAGATCACAGG
ACCAAGTTTTGCAGAAAATGCAGTTGCTACATCTTTGTAGTACTTGCTCTTTAAATGTCA
AATGGACTAGGTACTGTTTTTAAAAAAAAAAAAATTGGGGGAGTTCCCTGGTGACCTAGG
CCAGTAAGGACTCAGCGTTGTCATGGCTGTGGCTTGCGTGCCTACTGTGGCATGGATTTG
ATGCCTGGCGCAGGAACTTTTGCATGCTGCAGGCATAACCAAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               354-463, - strand, RNAz p=0.575052

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               354-463, - strand, RNAz p=0.575052

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               4-561, gnl|bosTau2|chr13 (20668249-20667654)
               

               
               4-561, gnl|Hg17|chr10 (18783035-18783641)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-561, gnl|bosTau2|chr13 (20668249-20667654)
               

               
               4-561, gnl|Hg17|chr10 (18783035-18783641)

	4-561, gnl\|bosTau2\|chr13 (20668249-20667654)
	4-561, gnl\|Hg17\|chr10 (18783035-18783641)