Non-Coding RNA Search

Pig3-SRG8005N16

Sequence:


               
               CAAAATAAACGGCTGAAACCTGAGGTGGAAAAAAAACAGCTTGAAGCTTTGAAAAGCATG
ATGGAAGCAGGAGAATCTGCTGCCCCTGTGAATATCCTAGAGGATGACAACGAAGAAGAA
ATCGAAATCGCGGAGCAAGAGGAAGAAGCTCACCCTGAGTACAAATACGAAACGAACTTT
CTGTGGACGACTTGGGTCACAAGGAAGCTATTGCCAATAGTGTCAAGAAGGCTTCAGATG
ACCTTGAACATGAAAACAACAAAAAGGGCCTGGTTACTGTAGAAGATGAGCAGGCGTGGA
TGGCATCTTATAAATATGTAGGTGCTACCACTAACATCCATCCGTATCTGTCCACAATGA
TCAACTATGCACAGCCCGTCAAGTTTCAAGGTTTCCATGTGGCTGAAGAACGCAATATTC
ATTATAACATGTCTTCTTTTAACGAGTCGGTCGGTCTATGCTACTTGAAAACGCACGCAA
TTGAATTCGTGAATTATAACAAACGGCAAATGAGTCGCATTTACCCCAAGGGAGGCCGAG
TCGATTCCAGTAATTACATGCCTCATATTTTCTGGAACGCTGGTTGCCAGATGGTTTCAC
TGAACTATCAAACCCCAGATTTAGCGATGCAATTGAATCAGGGGAAATTTGAGTATAATG
GATCGTGCGGATACCTTCTCAAGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAAAATAAACGGCTGAAACCTGAGGTGGAAAAAAAACAGCTTGAAGCTTTGAAAAGCATG
ATGGAAGCAGGAGAATCTGCTGCCCCTGTGAATATCCTAGAGGATGACAACGAAGAAGAA
ATCGAAATCGCGGAGCAAGAGGAAGAAGCTCACCCTGAGTACAAATACGAAACGAACTTT
CTGTGGACGACTTGGGTCACAAGGAAGCTATTGCCAATAGTGTCAAGAAGGCTTCAGATG
ACCTTGAACATGAAAACAACAAAAAGGGCCTGGTTACTGTAGAAGATGAGCAGGCGTGGA
TGGCATCTTATAAATATGTAGGTGCTACCACTAACATCCATCCGTATCTGTCCACAATGA
TCAACTATGCACAGCCCGTCAAGTTTCAAGGTTTCCATGTGGCTGAAGAACGCAATATTC
ATTATAACATGTCTTCTTTTAACGAGTCGGTCGGTCTATGCTACTTGAAAACGCACGCAA
TTGAATTCGTGAATTATAACAAACGGCAAATGAGTCGCATTTACCCCAAGGGAGGCCGAG
TCGATTCCAGTAATTACATGCCTCATATTTTCTGGAACGCTGGTTGCCAGATGGTTTCAC
TGAACTATCAAACCCCAGATTTAGCGATGCAATTGAATCAGGGGAAATTTGAGTATAATG
GATCGTGCGGATACCTTCTCAAGCC

Aligned organism(s): 9 entry(ies)

More info

Aligned organism(s): 9 entry(ies)

Help | Less info


               
               130-231, gnl|bosTau2|chr13 (372828-372930)
               

               
               130-231, gnl|Hg17|chr20 (9330136-9330238)
               

               
               130-231, gnl|Mm7|chr2 (135702571-135702673)
               


               
               265-408, gnl|bosTau2|chr13 (377931-378074)
               

               
               265-408, gnl|Hg17|chr20 (9336562-9336705)
               

               
               265-408, gnl|Mm7|chr2 (135707876-135708019)
               


               
               494-618, gnl|bosTau2|chr13 (379119-379243)
               

               
               494-618, gnl|Hg17|chr20 (9337704-9337828)
               

               
               494-618, gnl|Mm7|chr2 (135709174-135709298)

Aligned organism(s): 9 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               130-231, gnl|bosTau2|chr13 (372828-372930)
               

               
               130-231, gnl|Hg17|chr20 (9330136-9330238)
               

               
               130-231, gnl|Mm7|chr2 (135702571-135702673)
               


               
               265-408, gnl|bosTau2|chr13 (377931-378074)
               

               
               265-408, gnl|Hg17|chr20 (9336562-9336705)
               

               
               265-408, gnl|Mm7|chr2 (135707876-135708019)
               


               
               494-618, gnl|bosTau2|chr13 (379119-379243)
               

               
               494-618, gnl|Hg17|chr20 (9337704-9337828)
               

               
               494-618, gnl|Mm7|chr2 (135709174-135709298)

	130-231, gnl\|bosTau2\|chr13 (372828-372930)
	130-231, gnl\|Hg17\|chr20 (9330136-9330238)
	130-231, gnl\|Mm7\|chr2 (135702571-135702673)

	265-408, gnl\|bosTau2\|chr13 (377931-378074)
	265-408, gnl\|Hg17\|chr20 (9336562-9336705)
	265-408, gnl\|Mm7\|chr2 (135707876-135708019)

	494-618, gnl\|bosTau2\|chr13 (379119-379243)
	494-618, gnl\|Hg17\|chr20 (9337704-9337828)
	494-618, gnl\|Mm7\|chr2 (135709174-135709298)