Non-Coding RNA Search

Pig3-SRG8008D02

Sequence:


               
               TAATGTCATCATATCTGAAAAGTCCCTTTTGCCATGGAAGGTGGTGACATACTCAAGGTT
CCAGGGATGTTGGCACTTTGGCAGGCCATGAGTGAGCCTGCTACAAGCCACAAAAGGAGG
GACCCAATGTCCCAGTTTACTGTTGATCCCAGTACTTAGCACACACCCACATCATAGAAA
GCACTTGATTACTAGGTATAGAATGAATGCAAGCGCGAGATCATGCCTGCTCTTGGCACG
TGCACTCATCAGATGCTTATTAAGCACCTTCTATGAGCCAGACCTACAGGGTGTGGAGCC
GTCCTGGAGCACACAGGCAGCCCAGGCGAAGATGGAAAGGAGCATGCGTTTAAGCCCTGG
GTGTTCGAAGCCCAGGGAACAAAGGCACTGAGGCAAGGCTCTTTGTACTCTTGCACTTTC
TTCCTTTAATTACTGGCTGCTGTTGCATCTAAGAATTCTTTGAACATATCCCCTTGGCAA
ATATGATTAATTATATTCAGATTTATTTCTTTATTTCTAGTTTTCTCCCCCCCCTGGGTA
CTCTTCTGATATGTTAAGGAGTTTTTACTGAGAACTATTAAAAGAATCAATGATTAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAATGTCATCATATCTGAAAAGTCCCTTTTGCCATGGAAGGTGGTGACATACTCAAGGTT
CCAGGGATGTTGGCACTTTGGCAGGCCATGAGTGAGCCTGCTACAAGCCACAAAAGGAGG
GACCCAATGTCCCAGTTTACTGTTGATCCCAGTACTTAGCACACACCCACATCATAGAAA
GCACTTGATTACTAGGTATAGAATGAATGCAAGCGCGAGATCATGCCTGCTCTTGGCACG
TGCACTCATCAGATGCTTATTAAGCACCTTCTATGAGCCAGACCTACAGGGTGTGGAGCC
GTCCTGGAGCACACAGGCAGCCCAGGCGAAGATGGAAAGGAGCATGCGTTTAAGCCCTGG
GTGTTCGAAGCCCAGGGAACAAAGGCACTGAGGCAAGGCTCTTTGTACTCTTGCACTTTC
TTCCTTTAATTACTGGCTGCTGTTGCATCTAAGAATTCTTTGAACATATCCCCTTGGCAA
ATATGATTAATTATATTCAGATTTATTTCTTTATTTCTAGTTTTCTCCCCCCCCTGGGTA
CTCTTCTGATATGTTAAGGAGTTTTTACTGAGAACTATTAAAAGAATCAATGATTAAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               445-562, + strand, RNAz p=0.961406

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               445-562, + strand, RNAz p=0.961406

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               6-596, gnl|bosTau2|chr9 (32574463-32573881)
               

               
               6-596, gnl|Hg17|chr6 (91241553-91242146)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-596, gnl|bosTau2|chr9 (32574463-32573881)
               

               
               6-596, gnl|Hg17|chr6 (91241553-91242146)

	6-596, gnl\|bosTau2\|chr9 (32574463-32573881)
	6-596, gnl\|Hg17\|chr6 (91241553-91242146)