Non-Coding RNA Search

Pig3-SRG8008G01

Sequence:


               
               TTCAGCAGGCAAGTTGTTACCACTGACTGAAGAAGAGAAAACTGCAGCAGAGCAATTAAG
AGCTCACATGTCAGACTTATGAGGAAGAAATGGACTTGCCAAAAGGAACTCTAATGGGGA
AGAAATCAATCCCAGAAATTTAGGAAGATGTCTTGTTAACATTGATGACTATTGGTCGGG
AGATGACAAAGGAGATTTGGCTTGGGTGACTGGATAGTGATGCCTTCCACAGAAGAGGGG
GATACAAGAGAAGGGCAGGCAGAATGGAAATAAAGAGATTTTAAAAATATATGCACACAT
GCTTAGTAATTTCAGGCAAGGAAGTCCCAACACCATTTTGTATCTGTTTCTGTATAACTG
GGATAACACAGATGTCCTGACTGACCTATTGCAAAACAATATTACGTATTATCAGTCAGA
TGTGAATGAACATGCTTGGGAAATTAAAGGTTAGAAAAATATTTGTACTATATTATACAT
ATGTAAATAATTTTATTGTTGAAAATTCTGATCGCAGATGTGGTCACCTTATTGGTGAGA
CTGCTAATATGTGACTTAACTGTCTCCCACAATACCTAACTTAGTAGAAAGCTGGCTTTT
CTGTGACAGCTTCACTTTTATTTTTGTCCTGTTCCTTCTGCCTGCCAATGTTGAGCGTGA
GCTCTGCTTTCTAATGCTGTTTCTGATTGTCCCTGTCACATTTCAGGGACCTGAAATACA
CTTTGTTCTCCAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCAGCAGGCAAGTTGTTACCACTGACTGAAGAAGAGAAAACTGCAGCAGAGCAATTAAG
AGCTCACATGTCAGACTTATGAGGAAGAAATGGACTTGCCAAAAGGAACTCTAATGGGGA
AGAAATCAATCCCAGAAATTTAGGAAGATGTCTTGTTAACATTGATGACTATTGGTCGGG
AGATGACAAAGGAGATTTGGCTTGGGTGACTGGATAGTGATGCCTTCCACAGAAGAGGGG
GATACAAGAGAAGGGCAGGCAGAATGGAAATAAAGAGATTTTAAAAATATATGCACACAT
GCTTAGTAATTTCAGGCAAGGAAGTCCCAACACCATTTTGTATCTGTTTCTGTATAACTG
GGATAACACAGATGTCCTGACTGACCTATTGCAAAACAATATTACGTATTATCAGTCAGA
TGTGAATGAACATGCTTGGGAAATTAAAGGTTAGAAAAATATTTGTACTATATTATACAT
ATGTAAATAATTTTATTGTTGAAAATTCTGATCGCAGATGTGGTCACCTTATTGGTGAGA
CTGCTAATATGTGACTTAACTGTCTCCCACAATACCTAACTTAGTAGAAAGCTGGCTTTT
CTGTGACAGCTTCACTTTTATTTTTGTCCTGTTCCTTCTGCCTGCCAATGTTGAGCGTGA
GCTCTGCTTTCTAATGCTGTTTCTGATTGTCCCTGTCACATTTCAGGGACCTGAAATACA
CTTTGTTCTCCAAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               518-634, - strand, RNAz p=0.77273

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               518-634, - strand, RNAz p=0.77273

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               12-731, gnl|bosTau2|chr19 (4438739-4438019)
               

               
               12-731, gnl|Hg17|chr17 (54544490-54543743)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               12-731, gnl|bosTau2|chr19 (4438739-4438019)
               

               
               12-731, gnl|Hg17|chr17 (54544490-54543743)

	12-731, gnl\|bosTau2\|chr19 (4438739-4438019)
	12-731, gnl\|Hg17\|chr17 (54544490-54543743)