Non-Coding RNA Search

Pig3-SRG8008H08

Sequence:


               
               GAAAGGTGTGATTGCCATTATATATTTAGCAAGTGTGGTTATCATCTTATATGGAGCTTA
AATCTTGACTTTTCATATTTCTATTACATTTTGGGCATTTACCACTAACCAGACCAAACA
ACCTTGGTAAGGCTGAGATCTTATTAATACACTTTTACAGGTAAAATATTGATGCTTATA
AATTTTGTTCTTTGACAGAACAATATATGGTACTATAGATCTACTTTATTAAGTAGACTA
ATTATAACTCAGTTCTCCTATGTGCCTTATGATATAACTCGGAAGTAAGTTTGTGAAAAA
TCAGGATATATGTGTTGTTTGTTAAATTAACTGTTTTAAGCCCTTTTGACACCTCACTAG
TTTTGTACTGTTTTACCTCTTATTTCTGAAACTCTTTTTATGGTGTATCCTGTTAGAGGG
GACAAACATGTCATAGAAAGCAGTTGTGCACTCTTTCCAATATAGTTGATAAATTCAATA
ATCTTATATATTGAGCTTCGTGTTTCTAGTACAGTAAGTGGTCTAGCAAAATTGTCCATG
TTTCTTTGTTTATTGATAAATGCATTGTATAGAAACTATTTCCCCTAAATATTTATGGAC
CAAACAATTGTGATATATCCTATTAAATTTGTGTGAGTAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAAGGTGTGATTGCCATTATATATTTAGCAAGTGTGGTTATCATCTTATATGGAGCTTA
AATCTTGACTTTTCATATTTCTATTACATTTTGGGCATTTACCACTAACCAGACCAAACA
ACCTTGGTAAGGCTGAGATCTTATTAATACACTTTTACAGGTAAAATATTGATGCTTATA
AATTTTGTTCTTTGACAGAACAATATATGGTACTATAGATCTACTTTATTAAGTAGACTA
ATTATAACTCAGTTCTCCTATGTGCCTTATGATATAACTCGGAAGTAAGTTTGTGAAAAA
TCAGGATATATGTGTTGTTTGTTAAATTAACTGTTTTAAGCCCTTTTGACACCTCACTAG
TTTTGTACTGTTTTACCTCTTATTTCTGAAACTCTTTTTATGGTGTATCCTGTTAGAGGG
GACAAACATGTCATAGAAAGCAGTTGTGCACTCTTTCCAATATAGTTGATAAATTCAATA
ATCTTATATATTGAGCTTCGTGTTTCTAGTACAGTAAGTGGTCTAGCAAAATTGTCCATG
TTTCTTTGTTTATTGATAAATGCATTGTATAGAAACTATTTCCCCTAAATATTTATGGAC
CAAACAATTGTGATATATCCTATTAAATTTGTGTGAGTAAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               124-281, + strand, RNAz p=0.712722

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               124-281, + strand, RNAz p=0.712722

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               8-641, gnl|bosTau2|chr16 (56963918-56964551)
               

               
               8-641, gnl|Hg17|chr1 (194631607-194632245)
               

               
               8-641, gnl|Mm7|chr1 (138709872-138709245)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               8-641, gnl|bosTau2|chr16 (56963918-56964551)
               

               
               8-641, gnl|Hg17|chr1 (194631607-194632245)
               

               
               8-641, gnl|Mm7|chr1 (138709872-138709245)

	8-641, gnl\|bosTau2\|chr16 (56963918-56964551)
	8-641, gnl\|Hg17\|chr1 (194631607-194632245)
	8-641, gnl\|Mm7\|chr1 (138709872-138709245)