Pig3-SRG8012A21
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCGGGGCCCCAGCCGGGGTCTGGGCGGGCCGGGCCCGGCCCGTCCGCCGAGGCGCGCGA CGACGTCCGGGGCCCCGCGCCCGCCCCGCTGCAGCCGGAGGAGGTCGCGGCGCGGCTGCA GCGGATGCGCCGGGAGCTGAGCAACCGCAGGAAAATCCTGGTGAAAAACCTGCCCCAGGG CAGGAACTGCCAGGAAGTTCACGATTTATTACAAGACTATGAGTTAAAGTATTGTTATGT AGACAGAAATAAGCGAACAGCTTTTGTTACCTTATTGAATGGTGAACAAGCCCAGAAAGC AATTCAGACGTTTCATCAATATTCTTTTCGAGGAAAAGACTTAATAGTCCAGCTCCAGCC AACAGATGCTTTGCTGTGTATTACCAACTTACCCACTTCTTTTACATTAGAAGAGTTTGA AGAACTCGTTCGTGCTTATGGAAATATCGAGAGATGTTTTCTGGTCTACAGTGAAGTCAC TGGCTGTTCCAAAGGCTATGGATTTGTGGAATACATGAAGAATGACTCTGCTGCAAAGGC TCGGTTAGAGCTATTGGGTAAACAGTTGGGAGCATCAGCTCTCTCTGCACAGTGGATGGA TGTTAATCTATTGGCTGCAGAGCTCATTCATTCTAAGTGCCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCGGGGCCCCAGCCGGGGTCTGGGCGGGCCGGGCCCGGCCCGTCCGCCGAGGCGCGCGA CGACGTCCGGGGCCCCGCGCCCGCCCCGCTGCAGCCGGAGGAGGTCGCGGCGCGGCTGCA GCGGATGCGCCGGGAGCTGAGCAACCGCAGGAAAATCCTGGTGAAAAACCTGCCCCAGGG CAGGAACTGCCAGGAAGTTCACGATTTATTACAAGACTATGAGTTAAAGTATTGTTATGT AGACAGAAATAAGCGAACAGCTTTTGTTACCTTATTGAATGGTGAACAAGCCCAGAAAGC AATTCAGACGTTTCATCAATATTCTTTTCGAGGAAAAGACTTAATAGTCCAGCTCCAGCC AACAGATGCTTTGCTGTGTATTACCAACTTACCCACTTCTTTTACATTAGAAGAGTTTGA AGAACTCGTTCGTGCTTATGGAAATATCGAGAGATGTTTTCTGGTCTACAGTGAAGTCAC TGGCTGTTCCAAAGGCTATGGATTTGTGGAATACATGAAGAATGACTCTGCTGCAAAGGC TCGGTTAGAGCTATTGGGTAAACAGTTGGGAGCATCAGCTCTCTCTGCACAGTGGATGGA TGTTAATCTATTGGCTGCAGAGCTCATTCATTCTAAGTGCCT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 417-536, + strand, RNAz p=0.593279 | |
| 501-642, - strand, RNAz p=0.97896 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 417-536, + strand, RNAz p=0.593279 | |
| 501-642, - strand, RNAz p=0.97896 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 23-194, gnl|bosTau2|chr3 (54896275-54896104) | |
| 23-194, gnl|Hg17|chr1 (64922955-64923126) | |
| 23-194, gnl|Mm7|chr4 (100445611-100445769) | |
| 258-642, gnl|bosTau2|chr3 (54915414-54915798) | |
| 258-642, gnl|canFam2|chr5 (48479462-48479121) | |
| 258-642, gnl|danRer3|chr6 (15363590-15363263) | |
| 258-642, gnl|dasNov1|scaffold_1547 (30830-31174) | |
| 258-642, gnl|echTel1|scaffold_155719 (4324-3965) | |
| 258-642, gnl|fr1|chrUn (67746897-67746552) | |
| 258-642, gnl|galGal2|chr8 (28401318-28401662) | |
| 258-642, gnl|hg17|chr1 (64955309-64955653) | |
| 258-642, gnl|Hg17|chr1 (64955324-64955708) | |
| 258-642, gnl|loxAfr1|scaffold_11683 (54880-55224) | |
| 258-642, gnl|mm7|chr4 (100479029-100479373) | |
| 258-642, gnl|Mm7|chr4 (100479044-100479428) | |
| 258-642, gnl|monDom2|scaffold_40 (9986905-9986559) | |
| 258-642, gnl|oryCun1|scaffold_206796 (52392-52736) | |
| 258-642, gnl|panTro1|chr1 (63296232-63296576) | |
| 258-642, gnl|rheMac2|chr1 (67551048-67551392) | |
| 258-642, gnl|rn3|chr5 (121764766-121765110) | |
| 258-642, gnl|tetNig1|chr1 (15768038-15767722) | |
| 258-642, gnl|xenTro1|scaffold_1 (1747306-1746963) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 23-194, gnl|bosTau2|chr3 (54896275-54896104) | |
| 23-194, gnl|Hg17|chr1 (64922955-64923126) | |
| 23-194, gnl|Mm7|chr4 (100445611-100445769) | |
| 258-642, gnl|bosTau2|chr3 (54915414-54915798) | |
| 258-642, gnl|canFam2|chr5 (48479462-48479121) | |
| 258-642, gnl|danRer3|chr6 (15363590-15363263) | |
| 258-642, gnl|dasNov1|scaffold_1547 (30830-31174) | |
| 258-642, gnl|echTel1|scaffold_155719 (4324-3965) | |
| 258-642, gnl|fr1|chrUn (67746897-67746552) | |
| 258-642, gnl|galGal2|chr8 (28401318-28401662) | |
| 258-642, gnl|hg17|chr1 (64955309-64955653) | |
| 258-642, gnl|Hg17|chr1 (64955324-64955708) | |
| 258-642, gnl|loxAfr1|scaffold_11683 (54880-55224) | |
| 258-642, gnl|mm7|chr4 (100479029-100479373) | |
| 258-642, gnl|Mm7|chr4 (100479044-100479428) | |
| 258-642, gnl|monDom2|scaffold_40 (9986905-9986559) | |
| 258-642, gnl|oryCun1|scaffold_206796 (52392-52736) | |
| 258-642, gnl|panTro1|chr1 (63296232-63296576) | |
| 258-642, gnl|rheMac2|chr1 (67551048-67551392) | |
| 258-642, gnl|rn3|chr5 (121764766-121765110) | |
| 258-642, gnl|tetNig1|chr1 (15768038-15767722) | |
| 258-642, gnl|xenTro1|scaffold_1 (1747306-1746963) |