Non-Coding RNA Search

Pig3-SRG8012B18

Sequence:


               
               TCATGTTGTATATGACCTATTTCCTCCTCTTTGCCCAGTTCTTCCACCAAAACTACATTA
TTCCCAAGGCCAAAGCCAAGACCAAGAGCCAGTGAAAGGCTGGAGAATAAGAAGCCCCAA
GCTCTCTCCTCCCCAAGGCAATGAGGGGCAGAGCTTAGGTTTGGGAGAATGATTAGGATG
CTTTTCTTTCATGATTTCCCCAAAGGATGTGTGCCCTAAGGTTGCAGAAATTGTCACCCC
TGGGATGGGGGTGTCATCTAGTACTTTGATGTTTCTGCTTTTAACGTGAAGGCCAAGTGG
GCGCTGGGAGGGGTTAAAACTAAGGAGGCTCCCCGGAGCTGAGTTATAGTTACATAAGTC
TTTCTTCTCCTTGATTTTTTTTCTTTTTAGGGCCACACGTGCAGCATGTGGAAGTTCCAG
CTGATAGCTTACgccacatcaacaccagatctgagccatgtatgggacctataccatagc
tcacggcaatgtgagaaacttaacccactgagaaaggccagggattgaaccagaaacctc
atggatactagtcaggctcgttaccgatgagcTCCACCAGGAACTTCCTGCTCTATTTTT
AAATTAAAGATTTCCTCAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCATGTTGTATATGACCTATTTCCTCCTCTTTGCCCAGTTCTTCCACCAAAACTACATTA
TTCCCAAGGCCAAAGCCAAGACCAAGAGCCAGTGAAAGGCTGGAGAATAAGAAGCCCCAA
GCTCTCTCCTCCCCAAGGCAATGAGGGGCAGAGCTTAGGTTTGGGAGAATGATTAGGATG
CTTTTCTTTCATGATTTCCCCAAAGGATGTGTGCCCTAAGGTTGCAGAAATTGTCACCCC
TGGGATGGGGGTGTCATCTAGTACTTTGATGTTTCTGCTTTTAACGTGAAGGCCAAGTGG
GCGCTGGGAGGGGTTAAAACTAAGGAGGCTCCCCGGAGCTGAGTTATAGTTACATAAGTC
TTTCTTCTCCTTGATTTTTTTTCTTTTTAGGGCCACACGTGCAGCATGTGGAAGTTCCAG
CTGATAGCTTACgccacatcaacaccagatctgagccatgtatgggacctataccatagc
tcacggcaatgtgagaaacttaacccactgagaaaggccagggattgaaccagaaacctc
atggatactagtcaggctcgttaccgatgagcTCCACCAGGAACTTCCTGCTCTATTTTT
AAATTAAAGATTTCCTCAAAAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               155-251, + strand, RNAz p=0.992604

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               155-251, + strand, RNAz p=0.992604

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               3' of NM_152310, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               3' of NM_152310, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-389, gnl|bosTau2|chr26 (15364656-15365071)
               

               
               1-389, gnl|Hg17|chr10 (103978905-103979321)
               

               
               1-389, gnl|Mm7|chr19 (46031342-46031739)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-389, gnl|bosTau2|chr26 (15364656-15365071)
               

               
               1-389, gnl|Hg17|chr10 (103978905-103979321)
               

               
               1-389, gnl|Mm7|chr19 (46031342-46031739)

	1-389, gnl\|bosTau2\|chr26 (15364656-15365071)
	1-389, gnl\|Hg17\|chr10 (103978905-103979321)
	1-389, gnl\|Mm7\|chr19 (46031342-46031739)