Pig3-SRG8012G23
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAGAACTTCTCATTCAATTTTATAAGTCAACTCGGTTCAAACCTACTCGTATCATCTTTT ATCGGGATGGTGTTTCAGAGGGGCAATTTAAGCAGGTATTGTATTATGAACTACTAGCAA TTCGGGAAGCCTGCATCAGTTTGGAAAAAGACTATCAACCTGGAATAACTTACATTGTAG GTCAGAAGAGACATCACACTCGATTATTTTGTGCTGATAGGACTGAAAGGGTTGGAAGAA GTGGAAATATCCCAGCTGGAACAACAGTTGATACAGACATTACACACCCATATGAGTTTG ATTTTTACCTCTGTAGCCATGCTGGAATACAGGGTACCAGCCGTCCTTCACACTATCATG TTTTATGGGATGATAACTGCTTTACTGCAGATGAACTTCAGCTGCTAACTTACCAGCTCT GCCACACTTATGTGCGCTGTACACGATCTGTTTCTATACCTGCACCAGCGTATTATGCTC ACCTGGTAGCATTTAGAGCCAGATATCATCTTGTGGACAAAGAGCATGACAGTGCTGAAG GAAGTCATGTTTCATGACAGAGCAACGGACGATATCCACAAGCTCTTGCCAAGGCTGTAC AAATTCACCAAGATACCTTACGCACAATGTACTTTGCTTAAAAAGTCTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAGAACTTCTCATTCAATTTTATAAGTCAACTCGGTTCAAACCTACTCGTATCATCTTTT ATCGGGATGGTGTTTCAGAGGGGCAATTTAAGCAGGTATTGTATTATGAACTACTAGCAA TTCGGGAAGCCTGCATCAGTTTGGAAAAAGACTATCAACCTGGAATAACTTACATTGTAG GTCAGAAGAGACATCACACTCGATTATTTTGTGCTGATAGGACTGAAAGGGTTGGAAGAA GTGGAAATATCCCAGCTGGAACAACAGTTGATACAGACATTACACACCCATATGAGTTTG ATTTTTACCTCTGTAGCCATGCTGGAATACAGGGTACCAGCCGTCCTTCACACTATCATG TTTTATGGGATGATAACTGCTTTACTGCAGATGAACTTCAGCTGCTAACTTACCAGCTCT GCCACACTTATGTGCGCTGTACACGATCTGTTTCTATACCTGCACCAGCGTATTATGCTC ACCTGGTAGCATTTAGAGCCAGATATCATCTTGTGGACAAAGAGCATGACAGTGCTGAAG GAAGTCATGTTTCATGACAGAGCAACGGACGATATCCACAAGCTCTTGCCAAGGCTGTAC AAATTCACCAAGATACCTTACGCACAATGTACTTTGCTTAAAAAGTCTA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 410-529, - strand, RNAz p=0.730902 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 410-529, - strand, RNAz p=0.730902 |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 94-232, gnl|bosTau2|chr3 (76827963-76827825) | |
| 94-232, gnl|canFam2|chr15 (9168551-9168371) | |
| 94-232, gnl|danRer3|chr16 (52142240-52142049) | |
| 94-232, gnl|dasNov1|scaffold_83654 (4671-4852) | |
| 94-232, gnl|echTel1|scaffold_300119 (84823-84646) | |
| 94-232, gnl|fr1|chrUn (110357507-110357338) | |
| 94-232, gnl|galGal2|chr23 (3683031-3682829) | |
| 94-232, gnl|hg17|chr1 (36174999-36175179) | |
| 94-232, gnl|Hg17|chr1 (36174999-36175137) | |
| 94-232, gnl|loxAfr1|scaffold_29287 (14213-14395) | |
| 94-232, gnl|mm7|chr4 (125794971-125794796) | |
| 94-232, gnl|Mm7|chr4 (125794969-125794831) | |
| 94-232, gnl|monDom2|scaffold_43 (14207565-14207389) | |
| 94-232, gnl|oryCun1|scaffold_187836 (4029-3844) | |
| 94-232, gnl|panTro1|chr1 (37006217-37006397) | |
| 94-232, gnl|rheMac2|chr1 (38878606-38878786) | |
| 94-232, gnl|rn3|chr5 (145728521-145728237) | |
| 94-232, gnl|tetNig1|chrUn_random (83336538-83336397) | |
| 94-232, gnl|xenTro1|scaffold_163 (161964-162117) | |
| 330-532, gnl|bosTau2|chr14 (2890317-2890115) | |
| 330-532, gnl|canFam2|chr13 (38222993-38223204) | |
| 330-532, gnl|danRer3|chrNA (12545334-12545537) | |
| 330-532, gnl|dasNov1|scaffold_167241 (3474-3685) | |
| 330-532, gnl|echTel1|scaffold_286965 (248-37) | |
| 330-532, gnl|fr1|chrUn (71265731-71265941) | |
| 330-532, gnl|galGal2|chr2 (138253012-138252801) | |
| 330-532, gnl|hg17|chr8 (141611688-141611899) | |
| 330-532, gnl|Hg17|chr8 (141611898-141611697) | |
| 330-532, gnl|loxAfr1|scaffold_31811 (19523-19312) | |
| 330-532, gnl|mm7|chr15 (73186899-73187110) | |
| 330-532, gnl|Mm7|chr15 (73187110-73186908) | |
| 330-532, gnl|monDom2|scaffold_3 (5805039-5804828) | |
| 330-532, gnl|oryCun1|scaffold_83112 (6258-6047) | |
| 330-532, gnl|panTro1|chr7_random (11433136-11433347) | |
| 330-532, gnl|rheMac2|chr8 (143020568-143020779) | |
| 330-532, gnl|rn3|chr7 (110862362-110862573) | |
| 330-532, gnl|tetNig1|chr21_random (1116082-1116293) | |
| 330-532, gnl|xenTro1|scaffold_161 (1303418-1303625) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 94-232, gnl|bosTau2|chr3 (76827963-76827825) | |
| 94-232, gnl|canFam2|chr15 (9168551-9168371) | |
| 94-232, gnl|danRer3|chr16 (52142240-52142049) | |
| 94-232, gnl|dasNov1|scaffold_83654 (4671-4852) | |
| 94-232, gnl|echTel1|scaffold_300119 (84823-84646) | |
| 94-232, gnl|fr1|chrUn (110357507-110357338) | |
| 94-232, gnl|galGal2|chr23 (3683031-3682829) | |
| 94-232, gnl|hg17|chr1 (36174999-36175179) | |
| 94-232, gnl|Hg17|chr1 (36174999-36175137) | |
| 94-232, gnl|loxAfr1|scaffold_29287 (14213-14395) | |
| 94-232, gnl|mm7|chr4 (125794971-125794796) | |
| 94-232, gnl|Mm7|chr4 (125794969-125794831) | |
| 94-232, gnl|monDom2|scaffold_43 (14207565-14207389) | |
| 94-232, gnl|oryCun1|scaffold_187836 (4029-3844) | |
| 94-232, gnl|panTro1|chr1 (37006217-37006397) | |
| 94-232, gnl|rheMac2|chr1 (38878606-38878786) | |
| 94-232, gnl|rn3|chr5 (145728521-145728237) | |
| 94-232, gnl|tetNig1|chrUn_random (83336538-83336397) | |
| 94-232, gnl|xenTro1|scaffold_163 (161964-162117) | |
| 330-532, gnl|bosTau2|chr14 (2890317-2890115) | |
| 330-532, gnl|canFam2|chr13 (38222993-38223204) | |
| 330-532, gnl|danRer3|chrNA (12545334-12545537) | |
| 330-532, gnl|dasNov1|scaffold_167241 (3474-3685) | |
| 330-532, gnl|echTel1|scaffold_286965 (248-37) | |
| 330-532, gnl|fr1|chrUn (71265731-71265941) | |
| 330-532, gnl|galGal2|chr2 (138253012-138252801) | |
| 330-532, gnl|hg17|chr8 (141611688-141611899) | |
| 330-532, gnl|Hg17|chr8 (141611898-141611697) | |
| 330-532, gnl|loxAfr1|scaffold_31811 (19523-19312) | |
| 330-532, gnl|mm7|chr15 (73186899-73187110) | |
| 330-532, gnl|Mm7|chr15 (73187110-73186908) | |
| 330-532, gnl|monDom2|scaffold_3 (5805039-5804828) | |
| 330-532, gnl|oryCun1|scaffold_83112 (6258-6047) | |
| 330-532, gnl|panTro1|chr7_random (11433136-11433347) | |
| 330-532, gnl|rheMac2|chr8 (143020568-143020779) | |
| 330-532, gnl|rn3|chr7 (110862362-110862573) | |
| 330-532, gnl|tetNig1|chr21_random (1116082-1116293) | |
| 330-532, gnl|xenTro1|scaffold_161 (1303418-1303625) |