Pig3-SRG8012M03
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTTAAGTGAAAGAGACAGGATGATGGCAGGCCTATAAAGAGAACACCTAATGAAGAGAAC AAGGTCAAAGAGCAAATTAATTCTGTGGATGACTTTGATGACTTAACTCAGTTACCTGAA ACAGCTTCCAAGGATCATTCTGTTAGCGTATTGAAAAAGCAGGATTCAGTTCTTTCAGAT GACAGTTTACTAGAGATTAAAAAAAGCCACTATGAACTACTTACAGGAAAAATTAAAAAA ATGAAAAGTAAGATCATTGGGTTACGAACGGAGCTATCAGAAGCAAAAGAAGTGAAATCA CAGTTAGAACACCAAATACTGGGGTGGCAACAAGAGTTCTACAGTTTGAGATGCACCTTA AAACAAGAAGAGGAGAAAAGAAGAAATGTTTATAAGTTATATGAAAAAACTAGGAAGGAG TTAAGAAGAAGAAAAGAAAGATATGATAAAGAAGCTGAAATGAAACAGCAACTTGAACTG ACTGTCCAAGCACTGGACATGGAATTGAGGGCGGTGAGAAATAATCTGAACCAGGGTGAT GAGAGTCACGAAAAAGCAAAAGAACTGTTGCCTAAAAACCACATGTCACAGAATGAAATT GCCATGTTAAAACACGAAATAGAGGCAGTGGAAAATCATAACCAGGAAATGGAGAAGAAA TATTTTATGGACATGAAAATTGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTTAAGTGAAAGAGACAGGATGATGGCAGGCCTATAAAGAGAACACCTAATGAAGAGAAC AAGGTCAAAGAGCAAATTAATTCTGTGGATGACTTTGATGACTTAACTCAGTTACCTGAA ACAGCTTCCAAGGATCATTCTGTTAGCGTATTGAAAAAGCAGGATTCAGTTCTTTCAGAT GACAGTTTACTAGAGATTAAAAAAAGCCACTATGAACTACTTACAGGAAAAATTAAAAAA ATGAAAAGTAAGATCATTGGGTTACGAACGGAGCTATCAGAAGCAAAAGAAGTGAAATCA CAGTTAGAACACCAAATACTGGGGTGGCAACAAGAGTTCTACAGTTTGAGATGCACCTTA AAACAAGAAGAGGAGAAAAGAAGAAATGTTTATAAGTTATATGAAAAAACTAGGAAGGAG TTAAGAAGAAGAAAAGAAAGATATGATAAAGAAGCTGAAATGAAACAGCAACTTGAACTG ACTGTCCAAGCACTGGACATGGAATTGAGGGCGGTGAGAAATAATCTGAACCAGGGTGAT GAGAGTCACGAAAAAGCAAAAGAACTGTTGCCTAAAAACCACATGTCACAGAATGAAATT GCCATGTTAAAACACGAAATAGAGGCAGTGGAAAATCATAACCAGGAAATGGAGAAGAAA TATTTTATGGACATGAAAATTGT |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 231-350, + strand, RNAz p=0.780797 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 231-350, + strand, RNAz p=0.780797 |
| Aligned organism(s): 64 entry(ies) | More info |
| Aligned organism(s): 64 entry(ies) | Help | Less info |
| 137-350, gnl|bosTau2|chr13 (9545368-9545581) | |
| 137-350, gnl|canFam2|chr2 (7505238-7504954) | |
| 137-350, gnl|canFam2|chr2 (8651286-8651436) | |
| 137-350, gnl|canFam2|chr2 (9236342-9236599) | |
| 137-350, gnl|canFam2|chr2 (9236550-9236369) | |
| 137-350, gnl|canFam2|chr2 (7505133-7504967) | |
| 137-350, gnl|canFam2|chr2 (7504967-7505134) | |
| 137-350, gnl|echTel1|scaffold_290467 (76824-76541) | |
| 137-350, gnl|echTel1|scaffold_290467 (76563-76722) | |
| 137-350, gnl|echTel1|scaffold_290467 (76572-76825) | |
| 137-350, gnl|echTel1|scaffold_290467 (76780-76599) | |
| 137-350, gnl|echTel1|scaffold_290467 (76728-76526) | |
| 137-350, gnl|echTel1|scaffold_290467 (76509-76722) | |
| 137-350, gnl|galGal2|chr1 (21292422-21292157) | |
| 137-350, gnl|galGal2|chr1 (21292214-21292395) | |
| 137-350, gnl|Hg17|chr10 (27369113-27368900) | |
| 137-350, gnl|hg17|chr13 (18768772-18769054) | |
| 137-350, gnl|hg17|chr18 (14838687-14838965) | |
| 137-350, gnl|hg17|chr18 (15292812-15292992) | |
| 137-350, gnl|hg17|chr6 (39187466-39187645) | |
| 137-350, gnl|hg17|chr9 (64718627-64718804) | |
| 137-350, gnl|hg17|chr9 (64375917-64376089) | |
| 137-350, gnl|loxAfr1|scaffold_2697 (108563-108847) | |
| 137-350, gnl|loxAfr1|scaffold_2697 (108825-108660) | |
| 137-350, gnl|loxAfr1|scaffold_2697 (108816-108557) | |
| 137-350, gnl|loxAfr1|scaffold_2697 (108608-108789) | |
| 137-350, gnl|loxAfr1|scaffold_2697 (108653-108857) | |
| 137-350, gnl|loxAfr1|scaffold_2697 (108878-108666) | |
| 137-350, gnl|mm7|chr6 (118553365-118553091) | |
| 137-350, gnl|mm7|chr6 (118553115-118553264) | |
| 137-350, gnl|mm7|chr6 (118553115-118553361) | |
| 137-350, gnl|mm7|chr6 (118553323-118553142) | |
| 137-350, gnl|mm7|chr6 (118553263-118553115) | |
| 137-350, gnl|mm7|chr6 (118553115-118553264) | |
| 137-350, gnl|Mm7|chr6 (118553332-118553119) | |
| 137-350, gnl|monDom2|scaffold_22 (29864543-29864809) | |
| 137-350, gnl|monDom2|scaffold_22 (29864786-29864513) | |
| 137-350, gnl|monDom2|scaffold_42 (5957504-5957342) | |
| 137-350, gnl|oryCun1|scaffold_135256 (3963-4240) | |
| 137-350, gnl|oryCun1|scaffold_148590 (2433-2586) | |
| 137-350, gnl|oryCun1|scaffold_148590 (2594-2441) | |
| 137-350, gnl|oryCun1|scaffold_177470 (191990-192136) | |
| 137-350, gnl|oryCun1|scaffold_177470 (191999-192252) | |
| 137-350, gnl|oryCun1|scaffold_67098 (354-535) | |
| 137-350, gnl|panTro1|chr11 (48644289-48644468) | |
| 137-350, gnl|panTro1|chr14 (17664907-17665189) | |
| 137-350, gnl|panTro1|chr17_random (9517736-9517458) | |
| 137-350, gnl|panTro1|chr17_random (11324981-11325163) | |
| 137-350, gnl|panTro1|chr17_random (11324964-11325136) | |
| 137-350, gnl|panTro1|chr5 (39739508-39739687) | |
| 137-350, gnl|rheMac2|chr10 (61205424-61205680) | |
| 137-350, gnl|rheMac2|chr4 (38934673-38934853) | |
| 137-350, gnl|rheMac2|chr9 (37545274-37544996) | |
| 137-350, gnl|rheMac2|chr9 (37545018-37545159) | |
| 137-350, gnl|rheMac2|chr9 (37545148-37544974) | |
| 137-350, gnl|rheMac2|chr9 (37544966-37545148) | |
| 137-350, gnl|rn3|chr15 (19149311-19149474) | |
| 137-350, gnl|rn3|chr4 (155074214-155073938) | |
| 137-350, gnl|rn3|chr4 (155073969-155074118) | |
| 137-350, gnl|rn3|chr4 (155073969-155074215) | |
| 137-350, gnl|rn3|chr4 (155074177-155073996) | |
| 137-350, gnl|rn3|chr4 (155073969-155074118) | |
| 137-350, gnl|xenTro1|scaffold_17 (2564685-2564385) | |
| 137-350, gnl|xenTro1|scaffold_17 (2564420-2564702) |
| Aligned organism(s): 64 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 137-350, gnl|bosTau2|chr13 (9545368-9545581) | |
| 137-350, gnl|canFam2|chr2 (7505238-7504954) | |
| 137-350, gnl|canFam2|chr2 (8651286-8651436) | |
| 137-350, gnl|canFam2|chr2 (9236342-9236599) | |
| 137-350, gnl|canFam2|chr2 (9236550-9236369) | |
| 137-350, gnl|canFam2|chr2 (7505133-7504967) | |
| 137-350, gnl|canFam2|chr2 (7504967-7505134) | |
| 137-350, gnl|echTel1|scaffold_290467 (76824-76541) | |
| 137-350, gnl|echTel1|scaffold_290467 (76563-76722) | |
| 137-350, gnl|echTel1|scaffold_290467 (76572-76825) | |
| 137-350, gnl|echTel1|scaffold_290467 (76780-76599) | |
| 137-350, gnl|echTel1|scaffold_290467 (76728-76526) | |
| 137-350, gnl|echTel1|scaffold_290467 (76509-76722) | |
| 137-350, gnl|galGal2|chr1 (21292422-21292157) | |
| 137-350, gnl|galGal2|chr1 (21292214-21292395) | |
| 137-350, gnl|Hg17|chr10 (27369113-27368900) | |
| 137-350, gnl|hg17|chr13 (18768772-18769054) | |
| 137-350, gnl|hg17|chr18 (14838687-14838965) | |
| 137-350, gnl|hg17|chr18 (15292812-15292992) | |
| 137-350, gnl|hg17|chr6 (39187466-39187645) | |
| 137-350, gnl|hg17|chr9 (64718627-64718804) | |
| 137-350, gnl|hg17|chr9 (64375917-64376089) | |
| 137-350, gnl|loxAfr1|scaffold_2697 (108563-108847) | |
| 137-350, gnl|loxAfr1|scaffold_2697 (108825-108660) | |
| 137-350, gnl|loxAfr1|scaffold_2697 (108816-108557) | |
| 137-350, gnl|loxAfr1|scaffold_2697 (108608-108789) | |
| 137-350, gnl|loxAfr1|scaffold_2697 (108653-108857) | |
| 137-350, gnl|loxAfr1|scaffold_2697 (108878-108666) | |
| 137-350, gnl|mm7|chr6 (118553365-118553091) | |
| 137-350, gnl|mm7|chr6 (118553115-118553264) | |
| 137-350, gnl|mm7|chr6 (118553115-118553361) | |
| 137-350, gnl|mm7|chr6 (118553323-118553142) | |
| 137-350, gnl|mm7|chr6 (118553263-118553115) | |
| 137-350, gnl|mm7|chr6 (118553115-118553264) | |
| 137-350, gnl|Mm7|chr6 (118553332-118553119) | |
| 137-350, gnl|monDom2|scaffold_22 (29864543-29864809) | |
| 137-350, gnl|monDom2|scaffold_22 (29864786-29864513) | |
| 137-350, gnl|monDom2|scaffold_42 (5957504-5957342) | |
| 137-350, gnl|oryCun1|scaffold_135256 (3963-4240) | |
| 137-350, gnl|oryCun1|scaffold_148590 (2433-2586) | |
| 137-350, gnl|oryCun1|scaffold_148590 (2594-2441) | |
| 137-350, gnl|oryCun1|scaffold_177470 (191990-192136) | |
| 137-350, gnl|oryCun1|scaffold_177470 (191999-192252) | |
| 137-350, gnl|oryCun1|scaffold_67098 (354-535) | |
| 137-350, gnl|panTro1|chr11 (48644289-48644468) | |
| 137-350, gnl|panTro1|chr14 (17664907-17665189) | |
| 137-350, gnl|panTro1|chr17_random (9517736-9517458) | |
| 137-350, gnl|panTro1|chr17_random (11324981-11325163) | |
| 137-350, gnl|panTro1|chr17_random (11324964-11325136) | |
| 137-350, gnl|panTro1|chr5 (39739508-39739687) | |
| 137-350, gnl|rheMac2|chr10 (61205424-61205680) | |
| 137-350, gnl|rheMac2|chr4 (38934673-38934853) | |
| 137-350, gnl|rheMac2|chr9 (37545274-37544996) | |
| 137-350, gnl|rheMac2|chr9 (37545018-37545159) | |
| 137-350, gnl|rheMac2|chr9 (37545148-37544974) | |
| 137-350, gnl|rheMac2|chr9 (37544966-37545148) | |
| 137-350, gnl|rn3|chr15 (19149311-19149474) | |
| 137-350, gnl|rn3|chr4 (155074214-155073938) | |
| 137-350, gnl|rn3|chr4 (155073969-155074118) | |
| 137-350, gnl|rn3|chr4 (155073969-155074215) | |
| 137-350, gnl|rn3|chr4 (155074177-155073996) | |
| 137-350, gnl|rn3|chr4 (155073969-155074118) | |
| 137-350, gnl|xenTro1|scaffold_17 (2564685-2564385) | |
| 137-350, gnl|xenTro1|scaffold_17 (2564420-2564702) |