Pig3-SRG8015O18
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGGATTTGCTATCGTGTTTCTGGTGAGGACAAGCAATGGAATGAAATGTGCCTTGAAACG CATGTTTGTCAACAATGAGCATGATCTCCAGGTGTGCAAGAGAGAAATCCAGATAATGAG GGACCTGTCTGGGCACAAGAACATCGTGGGTTACATTGATTCCAGTATCAACAACGTGAG TAGCGGTGACGTGTGGGAAGTGCTCATTCTGATGGACTTCTGCAGGGGAGGCCAGGTGGT CAACCTAATGAACCAGCGCCTGCAAACAGGTTTTACAGAGAGTGAAGTGCTCCATATATT TTGTGACACCTGTGAAGCTGTTGCCCGCCTGCATCATTGCAAAACTCCGATTATCCACCG CGATCTGAAAGTTGAAAATATTCTGTTGCATGACCGAAGCCACTACGTCCTGTGTGACTT TGGAAGTGCTACCAACAAATTCCAGAATCCCCAAACTGAAGGAGTCAATGCAGTAGAAGA TGAGATTAAGAAATACACAACGCTGTCCTATCGAGCACCAGAAATGGTCAACCTGTACAG TGGCAAAATCATCACTACGAATGCAGACATTTGGGCTCTTGGATGTTTGTTGTATAAGTT ATGCTACTTCACTTTGCCATTTGGGGAGAGTCAAGTGGCAATTTGTGACGGAAACTGCAC AATTCCTGACAACTCTCGGTATTCCCAAGACATGCACTGCCTAATT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGGATTTGCTATCGTGTTTCTGGTGAGGACAAGCAATGGAATGAAATGTGCCTTGAAACG CATGTTTGTCAACAATGAGCATGATCTCCAGGTGTGCAAGAGAGAAATCCAGATAATGAG GGACCTGTCTGGGCACAAGAACATCGTGGGTTACATTGATTCCAGTATCAACAACGTGAG TAGCGGTGACGTGTGGGAAGTGCTCATTCTGATGGACTTCTGCAGGGGAGGCCAGGTGGT CAACCTAATGAACCAGCGCCTGCAAACAGGTTTTACAGAGAGTGAAGTGCTCCATATATT TTGTGACACCTGTGAAGCTGTTGCCCGCCTGCATCATTGCAAAACTCCGATTATCCACCG CGATCTGAAAGTTGAAAATATTCTGTTGCATGACCGAAGCCACTACGTCCTGTGTGACTT TGGAAGTGCTACCAACAAATTCCAGAATCCCCAAACTGAAGGAGTCAATGCAGTAGAAGA TGAGATTAAGAAATACACAACGCTGTCCTATCGAGCACCAGAAATGGTCAACCTGTACAG TGGCAAAATCATCACTACGAATGCAGACATTTGGGCTCTTGGATGTTTGTTGTATAAGTT ATGCTACTTCACTTTGCCATTTGGGGAGAGTCAAGTGGCAATTTGTGACGGAAACTGCAC AATTCCTGACAACTCTCGGTATTCCCAAGACATGCACTGCCTAATT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 3 entry(ies) | More info |
| Predicted RNA structure(s): 3 entry(ies) | Help | Less info |
| 1-118, + strand, RNAz p=0.542088 | |
| 227-345, - strand, RNAz p=0.594907 | |
| 574-706, + strand, RNAz p=0.941215 |
| Predicted RNA structure(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 1-118, + strand, RNAz p=0.542088 | |
| 227-345, - strand, RNAz p=0.594907 | |
| 574-706, + strand, RNAz p=0.941215 |
| Aligned organism(s): 57 entry(ies) | More info |
| Aligned organism(s): 57 entry(ies) | Help | Less info |
| 1-118, gnl|bosTau2|chr11 (48784291-48784408) | |
| 1-118, gnl|canFam2|chr10 (71416911-71417041) | |
| 1-118, gnl|danRer3|chr8 (41250074-41250202) | |
| 1-118, gnl|dasNov1|scaffold_109095 (4685-4555) | |
| 1-118, gnl|echTel1|scaffold_225736 (3001-2871) | |
| 1-118, gnl|fr1|chrUn (42094900-42094770) | |
| 1-118, gnl|galGal2|chr22 (42856-42726) | |
| 1-118, gnl|hg17|chr2 (69695639-69695769) | |
| 1-118, gnl|Hg17|chr2 (69695760-69695643) | |
| 1-118, gnl|loxAfr1|scaffold_56720 (4227-4097) | |
| 1-118, gnl|mm7|chr6 (87000224-87000094) | |
| 1-118, gnl|Mm7|chr6 (87000101-87000218) | |
| 1-118, gnl|monDom2|scaffold_1 (96425203-96425333) | |
| 1-118, gnl|oryCun1|scaffold_211238 (46333-46203) | |
| 1-118, gnl|panTro1|chr12 (71933148-71933278) | |
| 1-118, gnl|rheMac2|chr13 (69807085-69807215) | |
| 1-118, gnl|rn3|chr4 (121325861-121325731) | |
| 1-118, gnl|tetNig1|chr12 (523484-523354) | |
| 1-118, gnl|xenTro1|scaffold_110 (1274214-1274344) | |
| 227-372, gnl|bosTau2|chr11 (48805254-48805399) | |
| 227-372, gnl|canFam2|chr10 (71397795-71397967) | |
| 227-372, gnl|danRer3|chr8 (41243844-41244024) | |
| 227-372, gnl|dasNov1|scaffold_33766 (10353-10184) | |
| 227-372, gnl|echTel1|scaffold_313620 (36216-36381) | |
| 227-372, gnl|fr1|chrUn (42096398-42096241) | |
| 227-372, gnl|galGal2|chr22 (46565-46398) | |
| 227-372, gnl|hg17|chr2 (69681304-69681478) | |
| 227-372, gnl|Hg17|chr2 (69681449-69681304) | |
| 227-372, gnl|loxAfr1|scaffold_29463 (8057-7908) | |
| 227-372, gnl|mm7|chr6 (87012174-87012004) | |
| 227-372, gnl|Mm7|chr6 (87012027-87012172) | |
| 227-372, gnl|monDom2|scaffold_1 (96404727-96404892) | |
| 227-372, gnl|oryCun1|scaffold_198933 (96582-96753) | |
| 227-372, gnl|panTro1|chr12 (71918849-71919023) | |
| 227-372, gnl|rheMac2|chr13 (69789624-69789798) | |
| 227-372, gnl|rn3|chr4 (121336217-121336047) | |
| 227-372, gnl|tetNig1|chr12 (524167-524020) | |
| 227-372, gnl|xenTro1|scaffold_110 (1269618-1269766) | |
| 574-706, gnl|bosTau2|chr11 (48818000-48818132) | |
| 574-706, gnl|canFam2|chr10 (71388372-71388537) | |
| 574-706, gnl|danRer3|chr8 (41239846-41240022) | |
| 574-706, gnl|dasNov1|scaffold_145681 (3809-3978) | |
| 574-706, gnl|echTel1|scaffold_268231 (1104-946) | |
| 574-706, gnl|fr1|chrUn (42097153-42096987) | |
| 574-706, gnl|galGal2|chr22 (51972-51813) | |
| 574-706, gnl|hg17|chr2 (69668782-69668950) | |
| 574-706, gnl|Hg17|chr2 (69668924-69668792) | |
| 574-706, gnl|loxAfr1|scaffold_6446 (4508-4339) | |
| 574-706, gnl|mm7|chr6 (87022090-87021922) | |
| 574-706, gnl|Mm7|chr6 (87021946-87022078) | |
| 574-706, gnl|monDom2|scaffold_1 (96381186-96381356) | |
| 574-706, gnl|oryCun1|scaffold_198933 (86768-86935) | |
| 574-706, gnl|panTro1|chr12 (71906329-71906497) | |
| 574-706, gnl|rheMac2|chr13 (69779427-69779596) | |
| 574-706, gnl|rn3|chr4 (121346205-121346037) | |
| 574-706, gnl|tetNig1|chr4 (1547627-1547782) | |
| 574-706, gnl|xenTro1|scaffold_110 (1262717-1262865) |
| Aligned organism(s): 57 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-118, gnl|bosTau2|chr11 (48784291-48784408) | |
| 1-118, gnl|canFam2|chr10 (71416911-71417041) | |
| 1-118, gnl|danRer3|chr8 (41250074-41250202) | |
| 1-118, gnl|dasNov1|scaffold_109095 (4685-4555) | |
| 1-118, gnl|echTel1|scaffold_225736 (3001-2871) | |
| 1-118, gnl|fr1|chrUn (42094900-42094770) | |
| 1-118, gnl|galGal2|chr22 (42856-42726) | |
| 1-118, gnl|hg17|chr2 (69695639-69695769) | |
| 1-118, gnl|Hg17|chr2 (69695760-69695643) | |
| 1-118, gnl|loxAfr1|scaffold_56720 (4227-4097) | |
| 1-118, gnl|mm7|chr6 (87000224-87000094) | |
| 1-118, gnl|Mm7|chr6 (87000101-87000218) | |
| 1-118, gnl|monDom2|scaffold_1 (96425203-96425333) | |
| 1-118, gnl|oryCun1|scaffold_211238 (46333-46203) | |
| 1-118, gnl|panTro1|chr12 (71933148-71933278) | |
| 1-118, gnl|rheMac2|chr13 (69807085-69807215) | |
| 1-118, gnl|rn3|chr4 (121325861-121325731) | |
| 1-118, gnl|tetNig1|chr12 (523484-523354) | |
| 1-118, gnl|xenTro1|scaffold_110 (1274214-1274344) | |
| 227-372, gnl|bosTau2|chr11 (48805254-48805399) | |
| 227-372, gnl|canFam2|chr10 (71397795-71397967) | |
| 227-372, gnl|danRer3|chr8 (41243844-41244024) | |
| 227-372, gnl|dasNov1|scaffold_33766 (10353-10184) | |
| 227-372, gnl|echTel1|scaffold_313620 (36216-36381) | |
| 227-372, gnl|fr1|chrUn (42096398-42096241) | |
| 227-372, gnl|galGal2|chr22 (46565-46398) | |
| 227-372, gnl|hg17|chr2 (69681304-69681478) | |
| 227-372, gnl|Hg17|chr2 (69681449-69681304) | |
| 227-372, gnl|loxAfr1|scaffold_29463 (8057-7908) | |
| 227-372, gnl|mm7|chr6 (87012174-87012004) | |
| 227-372, gnl|Mm7|chr6 (87012027-87012172) | |
| 227-372, gnl|monDom2|scaffold_1 (96404727-96404892) | |
| 227-372, gnl|oryCun1|scaffold_198933 (96582-96753) | |
| 227-372, gnl|panTro1|chr12 (71918849-71919023) | |
| 227-372, gnl|rheMac2|chr13 (69789624-69789798) | |
| 227-372, gnl|rn3|chr4 (121336217-121336047) | |
| 227-372, gnl|tetNig1|chr12 (524167-524020) | |
| 227-372, gnl|xenTro1|scaffold_110 (1269618-1269766) | |
| 574-706, gnl|bosTau2|chr11 (48818000-48818132) | |
| 574-706, gnl|canFam2|chr10 (71388372-71388537) | |
| 574-706, gnl|danRer3|chr8 (41239846-41240022) | |
| 574-706, gnl|dasNov1|scaffold_145681 (3809-3978) | |
| 574-706, gnl|echTel1|scaffold_268231 (1104-946) | |
| 574-706, gnl|fr1|chrUn (42097153-42096987) | |
| 574-706, gnl|galGal2|chr22 (51972-51813) | |
| 574-706, gnl|hg17|chr2 (69668782-69668950) | |
| 574-706, gnl|Hg17|chr2 (69668924-69668792) | |
| 574-706, gnl|loxAfr1|scaffold_6446 (4508-4339) | |
| 574-706, gnl|mm7|chr6 (87022090-87021922) | |
| 574-706, gnl|Mm7|chr6 (87021946-87022078) | |
| 574-706, gnl|monDom2|scaffold_1 (96381186-96381356) | |
| 574-706, gnl|oryCun1|scaffold_198933 (86768-86935) | |
| 574-706, gnl|panTro1|chr12 (71906329-71906497) | |
| 574-706, gnl|rheMac2|chr13 (69779427-69779596) | |
| 574-706, gnl|rn3|chr4 (121346205-121346037) | |
| 574-706, gnl|tetNig1|chr4 (1547627-1547782) | |
| 574-706, gnl|xenTro1|scaffold_110 (1262717-1262865) |