Non-Coding RNA Search

Pig3-SRG8016B02

Sequence:


               
               GATGATGTTGTTGAATTTGAGAAAAGAGATGGCTAATTTTACTTTCAGTCAAATTTAAAA
TGACATTAAAGGAAAGTTTTTTGCTACAGAAGGATTTTCCATGTGTGAGCCAAGAAAAGC
AACAAAAGCTTCCAAGGGTTGTCAGTTTTAATTCTGTGTTCTTATTTTTATCTCGGGGTG
TTTCTATTAAAATATAAAGCTGGAGGAGCATCTTCATATTCTATTTAAATGTTGATGAGA
AATATCTTAGATGAAAGAAGAATCTTAGATGCATCCTGTAAAACCTTGAAAATGTGTATT
TTTTTCTTAAATTAGGTTGCATCAGTATTTTTCATGATGTTATCACAAACTTTTCTTTTT
TAAAATAACTGCCGATGTATGTAGGAAGTTTTGCTAGTATGTGTAATCTTTGAGATTCAG
CTAATCATTATAAGAGTGATTTTGTTTGTTTTTTTGGTTTTTGTTGCTtgcagcatatgg
aagttctcagctagggatcgaattggagcttctgctgccagcttacaccacaaccacagc
aacacctggtctcactcagtggttaaggatccggctttgcactgagctgtggtgtaggtc
acagacgtggctcggatcctgcatcgctgtggctgtggctgtggcgtaggctggcggctg
cagctcccatttgacccctagcctgggaacctccatatgccacaagtgtgcccctaaaaa

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATGATGTTGTTGAATTTGAGAAAAGAGATGGCTAATTTTACTTTCAGTCAAATTTAAAA
TGACATTAAAGGAAAGTTTTTTGCTACAGAAGGATTTTCCATGTGTGAGCCAAGAAAAGC
AACAAAAGCTTCCAAGGGTTGTCAGTTTTAATTCTGTGTTCTTATTTTTATCTCGGGGTG
TTTCTATTAAAATATAAAGCTGGAGGAGCATCTTCATATTCTATTTAAATGTTGATGAGA
AATATCTTAGATGAAAGAAGAATCTTAGATGCATCCTGTAAAACCTTGAAAATGTGTATT
TTTTTCTTAAATTAGGTTGCATCAGTATTTTTCATGATGTTATCACAAACTTTTCTTTTT
TAAAATAACTGCCGATGTATGTAGGAAGTTTTGCTAGTATGTGTAATCTTTGAGATTCAG
CTAATCATTATAAGAGTGATTTTGTTTGTTTTTTTGGTTTTTGTTGCTtgcagcatatgg
aagttctcagctagggatcgaattggagcttctgctgccagcttacaccacaaccacagc
aacacctggtctcactcagtggttaaggatccggctttgcactgagctgtggtgtaggtc
acagacgtggctcggatcctgcatcgctgtggctgtggctgtggcgtaggctggcggctg
cagctcccatttgacccctagcctgggaacctccatatgccacaagtgtgcccctaaaaa

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               1-118, + strand, RNAz p=0.576203

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-118, + strand, RNAz p=0.576203

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-420, gnl|bosTau2|chr29 (39374252-39374672)
               

               
               1-420, gnl|Hg17|chr11 (67709792-67709063)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-420, gnl|bosTau2|chr29 (39374252-39374672)
               

               
               1-420, gnl|Hg17|chr11 (67709792-67709063)

	1-420, gnl\|bosTau2\|chr29 (39374252-39374672)
	1-420, gnl\|Hg17\|chr11 (67709792-67709063)