Non-Coding RNA Search

Pig3-SRG8017P20

Sequence:


               
               CAAAAAGGAAAAAAAAAATTCTCTGAAAAGATTTTAGGGGGAAAAGTTGTTCTATTTTAA
AAAGCTTTGAGGGCTGTAAAGTGCCACGTTTTTCACACCTTCTTCATACTTTTTTTTCAG
ATTTTTTTAGTATGTTTAACATTTGTGAGATGACAGCCTTTTTGTATCTCAAACTGGATG
CTTCAAGATTTGTAGGGAGGGGTTGGTGGTATTCACGTTCTCTTGAGAAAGTTTATGCCT
AAAGGGCTCCTTCTTACTGGGAACTGTTTAAACCCTTGCAGGCGGACCTGTCAGGTTTTA
CTGTGTTATTTGCCTCCATTTTCAACATGCAAAAGTAACATGCAGTTAATGGTATTGGAA
TGAGACCACAGCAAGAGCAGAAACCTCTCGTGACAACTTTTCAGCTACATTATCTTGCTC
CTAAACTGTCTTGTCTTTTTTTTTTTTTTTTTTCTTTCTGAAACCACTTTTAAGATACCA
ACAGTTTTTCTTCAACAATTAGATTAAGCATATAATGTGGGTGCGCGGGCGCANGCGCGT
ACACGCAACTTTGGAAGTGCAGTCGTTTTAAACAGCAGAGCGAATAATTGGAACCGGTTG
CGGGGGGGGGGGGGGGCTTTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAAAAAGGAAAAAAAAAATTCTCTGAAAAGATTTTAGGGGGAAAAGTTGTTCTATTTTAA
AAAGCTTTGAGGGCTGTAAAGTGCCACGTTTTTCACACCTTCTTCATACTTTTTTTTCAG
ATTTTTTTAGTATGTTTAACATTTGTGAGATGACAGCCTTTTTGTATCTCAAACTGGATG
CTTCAAGATTTGTAGGGAGGGGTTGGTGGTATTCACGTTCTCTTGAGAAAGTTTATGCCT
AAAGGGCTCCTTCTTACTGGGAACTGTTTAAACCCTTGCAGGCGGACCTGTCAGGTTTTA
CTGTGTTATTTGCCTCCATTTTCAACATGCAAAAGTAACATGCAGTTAATGGTATTGGAA
TGAGACCACAGCAAGAGCAGAAACCTCTCGTGACAACTTTTCAGCTACATTATCTTGCTC
CTAAACTGTCTTGTCTTTTTTTTTTTTTTTTTTCTTTCTGAAACCACTTTTAAGATACCA
ACAGTTTTTCTTCAACAATTAGATTAAGCATATAATGTGGGTGCGCGGGCGCANGCGCGT
ACACGCAACTTTGGAAGTGCAGTCGTTTTAAACAGCAGAGCGAATAATTGGAACCGGTTG
CGGGGGGGGGGGGGGGCTTTTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               198-311, + strand, RNAz p=0.597258

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               198-311, + strand, RNAz p=0.597258

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-610, gnl|bosTau2|chr2 (35623418-35622802)
               

               
               1-610, gnl|Hg17|chr2 (145101460-145100839)
               

               
               1-610, gnl|Mm7|chr2 (45110001-45109380)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-610, gnl|bosTau2|chr2 (35623418-35622802)
               

               
               1-610, gnl|Hg17|chr2 (145101460-145100839)
               

               
               1-610, gnl|Mm7|chr2 (45110001-45109380)

	1-610, gnl\|bosTau2\|chr2 (35623418-35622802)
	1-610, gnl\|Hg17\|chr2 (145101460-145100839)
	1-610, gnl\|Mm7\|chr2 (45110001-45109380)