Non-Coding RNA Search

Pig3-SRG8019A19

Sequence:


               
               TGCAGAGCGAGGAGATCCATGGTCGTGAGAAGGCCCGGCCTGATCTTGGCGGGGCCTCCA
AGGCCAAGCCACCCACCGCTCCAGCCCCTCTGCCAGCTCCTGCCCCCTCCACCCAGTCCA
CACCCCCGTCCGCCCCCGTTCCCGGGAAGAAGGCTCGGGAGGAAGCTCCAGGGCCACCGG
GTGGGAGCCGGGCTGACATGCTGAAGCTGCGCTCACTTAGTGAGGGGCCTCCTAAAGAGC
TGAAGATCCGGCTCATCAAGGTGGAGAGCGGTGACAAGGAGACCTTCATCGCCTCGGAGG
TGGAAAATCGGAGGCTGCGGATGGCGGACCTCACCATCAGCCACTGCGCGGCCGATGTCG
TGCGGGCCANCAAGAATGCCAAGGTGAAAGGGAAGTTTCGAGAGTCCTACCTTTCTCCTG
CCCAGTCTGTGAAACCCAAGATCAACACTGAGGAGAAGCTGCCCCGGGAAAAACTCAACC
CGCCCACACCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCAGAGCGAGGAGATCCATGGTCGTGAGAAGGCCCGGCCTGATCTTGGCGGGGCCTCCA
AGGCCAAGCCACCCACCGCTCCAGCCCCTCTGCCAGCTCCTGCCCCCTCCACCCAGTCCA
CACCCCCGTCCGCCCCCGTTCCCGGGAAGAAGGCTCGGGAGGAAGCTCCAGGGCCACCGG
GTGGGAGCCGGGCTGACATGCTGAAGCTGCGCTCACTTAGTGAGGGGCCTCCTAAAGAGC
TGAAGATCCGGCTCATCAAGGTGGAGAGCGGTGACAAGGAGACCTTCATCGCCTCGGAGG
TGGAAAATCGGAGGCTGCGGATGGCGGACCTCACCATCAGCCACTGCGCGGCCGATGTCG
TGCGGGCCANCAAGAATGCCAAGGTGAAAGGGAAGTTTCGAGAGTCCTACCTTTCTCCTG
CCCAGTCTGTGAAACCCAAGATCAACACTGAGGAGAAGCTGCCCCGGGAAAAACTCAACC
CGCCCACACCC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               160-279, + strand, RNAz p=0.648084

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               160-279, + strand, RNAz p=0.648084

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-374, gnl|bosTau2|chr19 (15383798-15383425)
               

               
               1-374, gnl|Hg17|chr17 (7693399-7693772)
               

               
               1-374, gnl|Mm7|chr11 (69485952-69485579)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-374, gnl|bosTau2|chr19 (15383798-15383425)
               

               
               1-374, gnl|Hg17|chr17 (7693399-7693772)
               

               
               1-374, gnl|Mm7|chr11 (69485952-69485579)

	1-374, gnl\|bosTau2\|chr19 (15383798-15383425)
	1-374, gnl\|Hg17\|chr17 (7693399-7693772)
	1-374, gnl\|Mm7\|chr11 (69485952-69485579)