Non-Coding RNA Search

Pig3-SRG8019M07

Sequence:


               
               TTGAGGAGTAATCCTTTTCTTTTCATGTTAGTCCTTGGGGACTTTTATCCCATGATATAA
GACAGGAAAAGCATTAAGGATAAGTGAGGATTCTGTTATATTAATATATTGAATAAATGT
ATTGATCGATACTGGTGGTGATGAAGATCAAAGCATTTCACTTGACTCATGCGCATGATT
AAAGCATTTGGAAAATAGTTAAAAACATCCAAGGAATCCAGGTAAAGACATTCTGAGGGT
GAAGAGGTAGCTTCAGAAAGTTTGGTACAACCCCCCTTTCATTGTTCAATATTTATTCTG
AAACAGTTTGGGTTCTTTTAAAGGAATTGAGTACTTCATTCTCTCCCCAAAGAATGTACA
TATTTTAACAGGTTTTTTTTTTTTTATTTTTCCATTTGGGATGCTCAGTGGCACCATCAC
AGGCAGCATTTATTGTGATTTTCTTTGATAGAGAAGTGTCCTTGGGCACTTTGACGTGTG
TGGATGGAACCATTTCATTCTCAATTCCGTGCTTTCTGGATTCTTGGTCTGCTTTTGATG
TTTTTGTCTCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGAGGAGTAATCCTTTTCTTTTCATGTTAGTCCTTGGGGACTTTTATCCCATGATATAA
GACAGGAAAAGCATTAAGGATAAGTGAGGATTCTGTTATATTAATATATTGAATAAATGT
ATTGATCGATACTGGTGGTGATGAAGATCAAAGCATTTCACTTGACTCATGCGCATGATT
AAAGCATTTGGAAAATAGTTAAAAACATCCAAGGAATCCAGGTAAAGACATTCTGAGGGT
GAAGAGGTAGCTTCAGAAAGTTTGGTACAACCCCCCTTTCATTGTTCAATATTTATTCTG
AAACAGTTTGGGTTCTTTTAAAGGAATTGAGTACTTCATTCTCTCCCCAAAGAATGTACA
TATTTTAACAGGTTTTTTTTTTTTTATTTTTCCATTTGGGATGCTCAGTGGCACCATCAC
AGGCAGCATTTATTGTGATTTTCTTTGATAGAGAAGTGTCCTTGGGCACTTTGACGTGTG
TGGATGGAACCATTTCATTCTCAATTCCGTGCTTTCTGGATTCTTGGTCTGCTTTTGATG
TTTTTGTCTCTT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               442-551, - strand, RNAz p=0.830798

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               442-551, - strand, RNAz p=0.830798

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-551, gnl|bosTau2|chr4 (54806724-54807274)
               

               
               1-551, gnl|Hg17|chr7 (136665011-136664388)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-551, gnl|bosTau2|chr4 (54806724-54807274)
               

               
               1-551, gnl|Hg17|chr7 (136665011-136664388)

	1-551, gnl\|bosTau2\|chr4 (54806724-54807274)
	1-551, gnl\|Hg17\|chr7 (136665011-136664388)