Pig3-SRG8020A14
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTACGCTACTTAGGAGGAACTGCTGCCCCATATGAGAGCTGGAAGGGAAGTCTTAATGTG GATTACAATATCGGCCCTGGCTTTGCAGGGCATGATACTTTCAGGAAGGTTAAAATGCAT GTTCATAACATCAATCAAATCACAAGGATTTACAATGTGATTGGAACTATCAAAGGATCT GTGGAACCTGACAGGTATATTATTCTGGGAGGTCATCGAGACTCCTGGGTATTTGGAGGT ATTGACCCAACCAGTGGGGCTGCTGTTTTGCAAGAAGTTGCCCAGAGTTTTGGAAAACTG ATGAGTAGAGGATGGAGACCAAGAAGAACCATCATTTTTGCCAGCTGGGATGCAGAAGAG TTTGGACTTCTGGGTTCCACAGAATGGGCTGAGGAGAATGTAAAAACACTCCAGGAGAGA GGTGTTGCTTATATCAACTCAGATTCATCTGTAGAAGATCTCCAGCCCTGATGATGGTTT TGAGAGCAAATCTCTTTTTGAAAGCTGGTTGAAAAAGGACCCTTCATCTGAAAATAAAAA CCTGCCTAGAATCAGCAAGCTGGGATCTGGAAGTGAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTACGCTACTTAGGAGGAACTGCTGCCCCATATGAGAGCTGGAAGGGAAGTCTTAATGTG GATTACAATATCGGCCCTGGCTTTGCAGGGCATGATACTTTCAGGAAGGTTAAAATGCAT GTTCATAACATCAATCAAATCACAAGGATTTACAATGTGATTGGAACTATCAAAGGATCT GTGGAACCTGACAGGTATATTATTCTGGGAGGTCATCGAGACTCCTGGGTATTTGGAGGT ATTGACCCAACCAGTGGGGCTGCTGTTTTGCAAGAAGTTGCCCAGAGTTTTGGAAAACTG ATGAGTAGAGGATGGAGACCAAGAAGAACCATCATTTTTGCCAGCTGGGATGCAGAAGAG TTTGGACTTCTGGGTTCCACAGAATGGGCTGAGGAGAATGTAAAAACACTCCAGGAGAGA GGTGTTGCTTATATCAACTCAGATTCATCTGTAGAAGATCTCCAGCCCTGATGATGGTTT TGAGAGCAAATCTCTTTTTGAAAGCTGGTTGAAAAAGGACCCTTCATCTGAAAATAAAAA CCTGCCTAGAATCAGCAAGCTGGGATCTGGAAGTGAT |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 187-311, + strand, RNAz p=0.875621 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 187-311, + strand, RNAz p=0.875621 |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 5-111, gnl|bosTau2|chr29 (2149184-2149290) | |
| 5-111, gnl|canFam2|chr21 (13188845-13188681) | |
| 5-111, gnl|danRer3|chr1 (53197761-53197597) | |
| 5-111, gnl|dasNov1|scaffold_21460 (4462-4350) | |
| 5-111, gnl|echTel1|scaffold_310950 (5505-5354) | |
| 5-111, gnl|galGal2|chr1 (179309749-179309588) | |
| 5-111, gnl|hg17|chr11 (89532035-89532199) | |
| 5-111, gnl|Hg17|chr11 (89532054-89532160) | |
| 5-111, gnl|loxAfr1|scaffold_4074 (68189-68320) | |
| 5-111, gnl|mm7|chr9 (18215524-18215365) | |
| 5-111, gnl|Mm7|chr9 (18215505-18215399) | |
| 5-111, gnl|monDom2|scaffold_15 (9271715-9271547) | |
| 5-111, gnl|oryCun1|scaffold_214244 (63647-63807) | |
| 5-111, gnl|panTro1|chr9 (91352322-91352467) | |
| 5-111, gnl|rheMac2|chr14 (88601753-88601917) | |
| 5-111, gnl|rn3|chr8 (15813121-15812962) | |
| 187-311, gnl|bosTau2|chr29 (2154270-2154394) | |
| 187-311, gnl|canFam2|chr21 (13184186-13184045) | |
| 187-311, gnl|danRer3|chr1 (53192747-53192594) | |
| 187-311, gnl|dasNov1|scaffold_95021 (4787-4646) | |
| 187-311, gnl|echTel1|scaffold_310950 (736-595) | |
| 187-311, gnl|fr1|chrUn (98731752-98731893) | |
| 187-311, gnl|galGal2|chr1 (179306600-179306465) | |
| 187-311, gnl|hg17|chr11 (89536120-89536261) | |
| 187-311, gnl|Hg17|chr11 (89536122-89536246) | |
| 187-311, gnl|loxAfr1|scaffold_4074 (72463-72604) | |
| 187-311, gnl|mm7|chr9 (18203427-18203286) | |
| 187-311, gnl|Mm7|chr9 (18203423-18203299) | |
| 187-311, gnl|monDom2|scaffold_15 (9265385-9265241) | |
| 187-311, gnl|oryCun1|scaffold_214244 (66778-66919) | |
| 187-311, gnl|panTro1|chr9 (91356454-91356595) | |
| 187-311, gnl|rheMac2|chr14 (88605839-88605980) | |
| 187-311, gnl|rn3|chr8 (15799140-15798999) | |
| 187-311, gnl|tetNig1|chrUn_random (26261211-26261340) | |
| 187-311, gnl|xenTro1|scaffold_195 (305997-305858) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 5-111, gnl|bosTau2|chr29 (2149184-2149290) | |
| 5-111, gnl|canFam2|chr21 (13188845-13188681) | |
| 5-111, gnl|danRer3|chr1 (53197761-53197597) | |
| 5-111, gnl|dasNov1|scaffold_21460 (4462-4350) | |
| 5-111, gnl|echTel1|scaffold_310950 (5505-5354) | |
| 5-111, gnl|galGal2|chr1 (179309749-179309588) | |
| 5-111, gnl|hg17|chr11 (89532035-89532199) | |
| 5-111, gnl|Hg17|chr11 (89532054-89532160) | |
| 5-111, gnl|loxAfr1|scaffold_4074 (68189-68320) | |
| 5-111, gnl|mm7|chr9 (18215524-18215365) | |
| 5-111, gnl|Mm7|chr9 (18215505-18215399) | |
| 5-111, gnl|monDom2|scaffold_15 (9271715-9271547) | |
| 5-111, gnl|oryCun1|scaffold_214244 (63647-63807) | |
| 5-111, gnl|panTro1|chr9 (91352322-91352467) | |
| 5-111, gnl|rheMac2|chr14 (88601753-88601917) | |
| 5-111, gnl|rn3|chr8 (15813121-15812962) | |
| 187-311, gnl|bosTau2|chr29 (2154270-2154394) | |
| 187-311, gnl|canFam2|chr21 (13184186-13184045) | |
| 187-311, gnl|danRer3|chr1 (53192747-53192594) | |
| 187-311, gnl|dasNov1|scaffold_95021 (4787-4646) | |
| 187-311, gnl|echTel1|scaffold_310950 (736-595) | |
| 187-311, gnl|fr1|chrUn (98731752-98731893) | |
| 187-311, gnl|galGal2|chr1 (179306600-179306465) | |
| 187-311, gnl|hg17|chr11 (89536120-89536261) | |
| 187-311, gnl|Hg17|chr11 (89536122-89536246) | |
| 187-311, gnl|loxAfr1|scaffold_4074 (72463-72604) | |
| 187-311, gnl|mm7|chr9 (18203427-18203286) | |
| 187-311, gnl|Mm7|chr9 (18203423-18203299) | |
| 187-311, gnl|monDom2|scaffold_15 (9265385-9265241) | |
| 187-311, gnl|oryCun1|scaffold_214244 (66778-66919) | |
| 187-311, gnl|panTro1|chr9 (91356454-91356595) | |
| 187-311, gnl|rheMac2|chr14 (88605839-88605980) | |
| 187-311, gnl|rn3|chr8 (15799140-15798999) | |
| 187-311, gnl|tetNig1|chrUn_random (26261211-26261340) | |
| 187-311, gnl|xenTro1|scaffold_195 (305997-305858) |