Non-Coding RNA Search

Pig3-SRG8020J19

Sequence:


               
               GCAATGTTTTGTGTCAGTTATATCTCATAACACTGGGGAAAATAGGGACTGGGTGATAAT
GACCATCTCCTAAAGCCATTTCAAGGTTTGGATGATATATGTGAAAGGGCCTGGCGCGGT
GACTAAGTCACACCAGCTTCTTTCTTTCCTGTTTAGTGTCAGCTGGGAAGTTAAGGAGGG
CGGGTGGGTGTGGTACTGGCTGGATGGGGGCCCTTCCTCTATATTTATCTTCTTTATAAG
CCAATTATACTCTTGGTACAGTTTTGAGAAAAGAAAATGGAAGAGGCTACATAGCATTTA
ACATTCTTTTTGAAAAAACACACTGGCAGCAATTGCCAAATTACTGAAGTTCCCAGACGA
GGGAGCGAATGTTGTGTCTTGGCAAAGTGGGATGGGGAATTTTTAGTGTGATATTTGAAT
AAAGGAAATCTAAACTANGGGAAAGAAAAGCTGCCCCTGATCGGATCACTGTACAATGAA
GAGCTGTATAAAAACCATTTGTCCTCACCGCATGTTTACTTACCAATGGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAATGTTTTGTGTCAGTTATATCTCATAACACTGGGGAAAATAGGGACTGGGTGATAAT
GACCATCTCCTAAAGCCATTTCAAGGTTTGGATGATATATGTGAAAGGGCCTGGCGCGGT
GACTAAGTCACACCAGCTTCTTTCTTTCCTGTTTAGTGTCAGCTGGGAAGTTAAGGAGGG
CGGGTGGGTGTGGTACTGGCTGGATGGGGGCCCTTCCTCTATATTTATCTTCTTTATAAG
CCAATTATACTCTTGGTACAGTTTTGAGAAAAGAAAATGGAAGAGGCTACATAGCATTTA
ACATTCTTTTTGAAAAAACACACTGGCAGCAATTGCCAAATTACTGAAGTTCCCAGACGA
GGGAGCGAATGTTGTGTCTTGGCAAAGTGGGATGGGGAATTTTTAGTGTGATATTTGAAT
AAAGGAAATCTAAACTANGGGAAAGAAAAGCTGCCCCTGATCGGATCACTGTACAATGAA
GAGCTGTATAAAAACCATTTGTCCTCACCGCATGTTTACTTACCAATGGGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               284-421, + strand, RNAz p=0.996531

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               284-421, + strand, RNAz p=0.996531

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               173-531, gnl|bosTau2|chr11 (23686590-23686205)
               

               
               173-531, gnl|Hg17|chr2 (46176878-46177236)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               173-531, gnl|bosTau2|chr11 (23686590-23686205)
               

               
               173-531, gnl|Hg17|chr2 (46176878-46177236)

	173-531, gnl\|bosTau2\|chr11 (23686590-23686205)
	173-531, gnl\|Hg17\|chr2 (46176878-46177236)