Pig3-SRG8021B09
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAAGGAAGTGGTGAGGTTAACAGTAGTTTCAGCCCTTCCCTGAAATAAAAGGTAAGTGTA GTCAGTATAATAAACCTATTTGTTAATTATTTGTCAAAGATAGTGGCTTTTGTTAAAATG TTTTGTTAAGATGTTTGGAGAAAACCTTAAGGATTATACTCACTTTTTATTTATTAAATG TTTTAATTCAGTTTTAGTAATTAAGTACTGTGATTGATATATACATATATAATGTATTTA TGTAATAATTTATATATCTATCATATATATGTACATATATACATTTGAGATCTTATATTA AAAAAAGGGTAATCTTTGTTTTTGTGAAATCTGTGATGGGTTGACCTAAGCTAGCTGCTT TTTTACTTCATTTTCCTTTTAAATTCGTTTATCTCACTGCCTATGGACAATATCCCACTA AACATAGGGTTACAGAACAGAGTCAATGAACAGAGGATACTTGCATTTGCCCTGTGCTCT ACCTACCATCAATATTGATAAAATGGCAAGATGGAAAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAAGGAAGTGGTGAGGTTAACAGTAGTTTCAGCCCTTCCCTGAAATAAAAGGTAAGTGTA GTCAGTATAATAAACCTATTTGTTAATTATTTGTCAAAGATAGTGGCTTTTGTTAAAATG TTTTGTTAAGATGTTTGGAGAAAACCTTAAGGATTATACTCACTTTTTATTTATTAAATG TTTTAATTCAGTTTTAGTAATTAAGTACTGTGATTGATATATACATATATAATGTATTTA TGTAATAATTTATATATCTATCATATATATGTACATATATACATTTGAGATCTTATATTA AAAAAAGGGTAATCTTTGTTTTTGTGAAATCTGTGATGGGTTGACCTAAGCTAGCTGCTT TTTTACTTCATTTTCCTTTTAAATTCGTTTATCTCACTGCCTATGGACAATATCCCACTA AACATAGGGTTACAGAACAGAGTCAATGAACAGAGGATACTTGCATTTGCCCTGTGCTCT ACCTACCATCAATATTGATAAAATGGCAAGATGGAAAT |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 382-500, - strand, RNAz p=0.618742 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 382-500, - strand, RNAz p=0.618742 |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 3-134, gnl|bosTau2|chr22 (6781334-6781462) | |
| 3-134, gnl|canFam2|chr23 (8747165-8747472) | |
| 3-134, gnl|dasNov1|scaffold_2029 (63826-64115) | |
| 3-134, gnl|echTel1|scaffold_61068 (387-723) | |
| 3-134, gnl|hg17|chr3 (35671097-35671402) | |
| 3-134, gnl|Hg17|chr3 (35671247-35671376) | |
| 3-134, gnl|loxAfr1|scaffold_5293 (16679-16368) | |
| 3-134, gnl|mm7|chr9 (111917977-111917625) | |
| 3-134, gnl|Mm7|chr9 (111917782-111917649) | |
| 3-134, gnl|oryCun1|scaffold_209581 (85067-84765) | |
| 3-134, gnl|panTro1|chr2 (36688441-36688746) | |
| 3-134, gnl|rheMac2|chr2 (178062965-178063270) | |
| 3-134, gnl|rn3|chr8 (116845068-116844746) | |
| 167-517, gnl|bosTau2|chr22 (6781704-6782054) | |
| 167-517, gnl|canFam2|chr23 (8747701-8748484) | |
| 167-517, gnl|dasNov1|scaffold_2029 (64357-65053) | |
| 167-517, gnl|echTel1|scaffold_61068 (959-1733) | |
| 167-517, gnl|hg17|chr3 (35671631-35672303) | |
| 167-517, gnl|Hg17|chr3 (35671630-35671997) | |
| 167-517, gnl|loxAfr1|scaffold_5293 (16126-15429) | |
| 167-517, gnl|mm7|chr9 (111917364-111916696) | |
| 167-517, gnl|oryCun1|scaffold_209581 (84547-83862) | |
| 167-517, gnl|panTro1|chr2 (36688975-36689648) | |
| 167-517, gnl|rheMac2|chr2 (178063500-178064172) | |
| 167-517, gnl|rn3|chr8 (116844514-116843820) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-134, gnl|bosTau2|chr22 (6781334-6781462) | |
| 3-134, gnl|canFam2|chr23 (8747165-8747472) | |
| 3-134, gnl|dasNov1|scaffold_2029 (63826-64115) | |
| 3-134, gnl|echTel1|scaffold_61068 (387-723) | |
| 3-134, gnl|hg17|chr3 (35671097-35671402) | |
| 3-134, gnl|Hg17|chr3 (35671247-35671376) | |
| 3-134, gnl|loxAfr1|scaffold_5293 (16679-16368) | |
| 3-134, gnl|mm7|chr9 (111917977-111917625) | |
| 3-134, gnl|Mm7|chr9 (111917782-111917649) | |
| 3-134, gnl|oryCun1|scaffold_209581 (85067-84765) | |
| 3-134, gnl|panTro1|chr2 (36688441-36688746) | |
| 3-134, gnl|rheMac2|chr2 (178062965-178063270) | |
| 3-134, gnl|rn3|chr8 (116845068-116844746) | |
| 167-517, gnl|bosTau2|chr22 (6781704-6782054) | |
| 167-517, gnl|canFam2|chr23 (8747701-8748484) | |
| 167-517, gnl|dasNov1|scaffold_2029 (64357-65053) | |
| 167-517, gnl|echTel1|scaffold_61068 (959-1733) | |
| 167-517, gnl|hg17|chr3 (35671631-35672303) | |
| 167-517, gnl|Hg17|chr3 (35671630-35671997) | |
| 167-517, gnl|loxAfr1|scaffold_5293 (16126-15429) | |
| 167-517, gnl|mm7|chr9 (111917364-111916696) | |
| 167-517, gnl|oryCun1|scaffold_209581 (84547-83862) | |
| 167-517, gnl|panTro1|chr2 (36688975-36689648) | |
| 167-517, gnl|rheMac2|chr2 (178063500-178064172) | |
| 167-517, gnl|rn3|chr8 (116844514-116843820) |