Non-Coding RNA Search

Pig3-SRG8023K04

Sequence:


               
               TGTTAGAAAGGAGACCCGACTGCAACTGCTGGATTGCTGCAAGGCTGAGGGACGAGAACG
AGGCTGGCCAACATTCAGCAGCAGACCCTCTCAAGATTGTCTACCTACCCTCACTCCTGT
TGAGTTACCACGCATGGAAGCACGAGATGGGCACAGCAGCATCCAACATGCCATGATCCA
GGAGGAGCAGTGAGGGACAGATCTGCTGAATGCATTCAGAGGGCAGCCTTGTGGATGGCC
CCAAAGCAAGCCTGATGGAACAGGATAGAACCAACCATGTTGAGGGCAACAGACTAAGTC
CATTCCTGATACCATCTCCTTCTCCCATTTGCCAGACAGAACCTCTGGCTATCAAGCTCC
ACAATGGAAGCCCATTAACTGACATACCTTATCCAGAAGTAAATGGAGACACCAAGTGGC
AGTCTTTCAAAAGTTATTCTGGAATACCCCACATGAAGGGAAACCAACGTAGTCGTGTGA
GTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTTAGAAAGGAGACCCGACTGCAACTGCTGGATTGCTGCAAGGCTGAGGGACGAGAACG
AGGCTGGCCAACATTCAGCAGCAGACCCTCTCAAGATTGTCTACCTACCCTCACTCCTGT
TGAGTTACCACGCATGGAAGCACGAGATGGGCACAGCAGCATCCAACATGCCATGATCCA
GGAGGAGCAGTGAGGGACAGATCTGCTGAATGCATTCAGAGGGCAGCCTTGTGGATGGCC
CCAAAGCAAGCCTGATGGAACAGGATAGAACCAACCATGTTGAGGGCAACAGACTAAGTC
CATTCCTGATACCATCTCCTTCTCCCATTTGCCAGACAGAACCTCTGGCTATCAAGCTCC
ACAATGGAAGCCCATTAACTGACATACCTTATCCAGAAGTAAATGGAGACACCAAGTGGC
AGTCTTTCAAAAGTTATTCTGGAATACCCCACATGAAGGGAAACCAACGTAGTCGTGTGA
GTCC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               327-446, - strand, RNAz p=0.550998

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               327-446, - strand, RNAz p=0.550998

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               208-484, gnl|bosTau2|chr6 (6105165-6105441)
               

               
               208-484, gnl|Hg17|chr4 (106512657-106512930)
               

               
               208-484, gnl|Mm7|chr3 (133285647-133285371)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               208-484, gnl|bosTau2|chr6 (6105165-6105441)
               

               
               208-484, gnl|Hg17|chr4 (106512657-106512930)
               

               
               208-484, gnl|Mm7|chr3 (133285647-133285371)

	208-484, gnl\|bosTau2\|chr6 (6105165-6105441)
	208-484, gnl\|Hg17\|chr4 (106512657-106512930)
	208-484, gnl\|Mm7\|chr3 (133285647-133285371)