Non-Coding RNA Search

Pig3-SRG8025E16

Sequence:


               
               GCCTGAAGATAAATGCAAAGCTTGGAGGAATCAACAATGTGCTTGTACCTCATCAAAGGC
CTTCGGTGTTCCAGCAGCCTGTCATCTTCCTGGGAGCAGATGTCACGCACCCCCCAGCAG
GGGATGGCAAGAAGCCTTCCATCGCCGCTGTTGTTGGCAGTATGGATGGCCACCCCAGCC
GGGGCTGTGCTACTGTTCGGGTGCAGACCTCTCGCCAGGAGATCTCCCAGGAGCTCCTCT
ATAGTCAGGAGGTAATCCAGGACCTCACTAACATGGTTCGAGAGCTGCTGATTCAGTTCT
ACAAATCCACACGCTTCAAACCCACTCGGATCATCTATTACCGTGGAGGGGTATCCGAGG
GACAGATGAAACAGGTAGCTTGGCCAGAACTAATAGCAATTCGAAAAGCATGTATTAGCT
TGGAAGAAGATTATCGGCCAGGAATAACCTATATTGTGGTTCAGAAAAGACATCACACAA
GACTCTTCTGTGCGGATAAAACAGAAAGGGTGGGGAAAAGTGGCAACGTACCAGCATGCA
CTACTGTGGACAGCACCATCACACATCCATCTGAGTTTGACTTTTACCTCTGTAGTCATG
CAGGAATTCANGGAACCAGCCGTCCGTCACATTACCAGGTCTTGTGGGATGACAACTGCT
TCACTGCAGATGAGCTCCAGTTACTAACTTACCAGCTGTGTCATACTTAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCTGAAGATAAATGCAAAGCTTGGAGGAATCAACAATGTGCTTGTACCTCATCAAAGGC
CTTCGGTGTTCCAGCAGCCTGTCATCTTCCTGGGAGCAGATGTCACGCACCCCCCAGCAG
GGGATGGCAAGAAGCCTTCCATCGCCGCTGTTGTTGGCAGTATGGATGGCCACCCCAGCC
GGGGCTGTGCTACTGTTCGGGTGCAGACCTCTCGCCAGGAGATCTCCCAGGAGCTCCTCT
ATAGTCAGGAGGTAATCCAGGACCTCACTAACATGGTTCGAGAGCTGCTGATTCAGTTCT
ACAAATCCACACGCTTCAAACCCACTCGGATCATCTATTACCGTGGAGGGGTATCCGAGG
GACAGATGAAACAGGTAGCTTGGCCAGAACTAATAGCAATTCGAAAAGCATGTATTAGCT
TGGAAGAAGATTATCGGCCAGGAATAACCTATATTGTGGTTCAGAAAAGACATCACACAA
GACTCTTCTGTGCGGATAAAACAGAAAGGGTGGGGAAAAGTGGCAACGTACCAGCATGCA
CTACTGTGGACAGCACCATCACACATCCATCTGAGTTTGACTTTTACCTCTGTAGTCATG
CAGGAATTCANGGAACCAGCCGTCCGTCACATTACCAGGTCTTGTGGGATGACAACTGCT
TCACTGCAGATGAGCTCCAGTTACTAACTTACCAGCTGTGTCATACTTAT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|7019863|dbj|BAA90899.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|7019863|dbj|BAA90899.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               57-377, gnl|bosTau2|chr3 (77031316-77030996)
               

               
               57-377, gnl|Hg17|chr1 (35975857-35976177)
               

               
               57-377, gnl|Mm7|chr4 (125951975-125951655)
               


               
               509-612, gnl|bosTau2|chr14 (2892061-2891958)
               

               
               509-612, gnl|Hg17|chr8 (141614851-141614748)
               

               
               509-612, gnl|Mm7|chr15 (73188217-73188114)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               57-377, gnl|bosTau2|chr3 (77031316-77030996)
               

               
               57-377, gnl|Hg17|chr1 (35975857-35976177)
               

               
               57-377, gnl|Mm7|chr4 (125951975-125951655)
               


               
               509-612, gnl|bosTau2|chr14 (2892061-2891958)
               

               
               509-612, gnl|Hg17|chr8 (141614851-141614748)
               

               
               509-612, gnl|Mm7|chr15 (73188217-73188114)

	57-377, gnl\|bosTau2\|chr3 (77031316-77030996)
	57-377, gnl\|Hg17\|chr1 (35975857-35976177)
	57-377, gnl\|Mm7\|chr4 (125951975-125951655)

	509-612, gnl\|bosTau2\|chr14 (2892061-2891958)
	509-612, gnl\|Hg17\|chr8 (141614851-141614748)
	509-612, gnl\|Mm7\|chr15 (73188217-73188114)