Pig3-SRG8026B11
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGTCATCAAGCATCTGATGCGGAAGGAGTTCACGCTGGAGTTCTCCCGGGACCGCAAGT CCATGTCCGTGTACTGCACGCCCACCCGCCCCGGCCTGGTGGCCCATGGCAGCAAGATGT TTGTGAAGGGGGCTCCTGAGAGTGTGATCGATCGCTGCATCTCCGTCCGCGTGGGGAGCC GCGCGGTACCCCTGAACACCACCTCCAGGGAGCATATCCTGGCCAAGGTCCGGGACTGGG GCTCGGGCTCGGACACTCTGCGCTGCCTGGCACTGGCCACCCGGGATGCACCCCCGAGGA AGGATGCCATGCATCTGGACGACTGCAGCAAGTTTGTGCAGTACGATACATACCTGACTT TCGTGGGCTGCGTGGGCATGTTGGACCCTCCGAGGCCTGAGGTGGCTTCCTGTATTGCAC GCTGCCGCCAGGCGGGCATCCGTGTGGTCATGATCACAGGGGACAACAAAGGCACCGCCG TATCCATCTGCCGCCGCCTTGGCATCCTCGAGGACACATATGACGTGGTATGCAATGCCT ACACGGGCCGCGAATTCGATGACCTCATCCCTGATCATCATCGCCACGCCTGCCGCACGG CTCGCTGCTTCGCCCGGGTGGAACCCGCCCACAAGTCCCGCAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGTCATCAAGCATCTGATGCGGAAGGAGTTCACGCTGGAGTTCTCCCGGGACCGCAAGT CCATGTCCGTGTACTGCACGCCCACCCGCCCCGGCCTGGTGGCCCATGGCAGCAAGATGT TTGTGAAGGGGGCTCCTGAGAGTGTGATCGATCGCTGCATCTCCGTCCGCGTGGGGAGCC GCGCGGTACCCCTGAACACCACCTCCAGGGAGCATATCCTGGCCAAGGTCCGGGACTGGG GCTCGGGCTCGGACACTCTGCGCTGCCTGGCACTGGCCACCCGGGATGCACCCCCGAGGA AGGATGCCATGCATCTGGACGACTGCAGCAAGTTTGTGCAGTACGATACATACCTGACTT TCGTGGGCTGCGTGGGCATGTTGGACCCTCCGAGGCCTGAGGTGGCTTCCTGTATTGCAC GCTGCCGCCAGGCGGGCATCCGTGTGGTCATGATCACAGGGGACAACAAAGGCACCGCCG TATCCATCTGCCGCCGCCTTGGCATCCTCGAGGACACATATGACGTGGTATGCAATGCCT ACACGGGCCGCGAATTCGATGACCTCATCCCTGATCATCATCGCCACGCCTGCCGCACGG CTCGCTGCTTCGCCCGGGTGGAACCCGCCCACAAGTCCCGCAAAA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 124-237, + strand, RNAz p=0.580317 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 124-237, + strand, RNAz p=0.580317 |
| Aligned organism(s): 41 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
| 124-346, gnl|bosTau2|chr19 (19135246-19135024) | |
| 124-346, gnl|canFam2|chr9 (51034209-51034362) | |
| 124-346, gnl|danRer3|chr5 (26152521-26152674) | |
| 124-346, gnl|dasNov1|scaffold_13617 (6708-6843) | |
| 124-346, gnl|echTel1|scaffold_219181 (8528-8682) | |
| 124-346, gnl|fr1|chrUn (56442208-56442057) | |
| 124-346, gnl|galGal2|chr19 (3048353-3048211) | |
| 124-346, gnl|hg17|chr17 (3791475-3791628) | |
| 124-346, gnl|Hg17|chr17 (3791702-3791480) | |
| 124-346, gnl|loxAfr1|scaffold_18353 (42463-42616) | |
| 124-346, gnl|mm7|chr11 (73061925-73061772) | |
| 124-346, gnl|Mm7|chr11 (73061696-73061918) | |
| 124-346, gnl|monDom2|scaffold_5 (119377886-119378039) | |
| 124-346, gnl|oryCun1|scaffold_213267 (9844-9997) | |
| 124-346, gnl|panTro1|chr19 (4092605-4092748) | |
| 124-346, gnl|rheMac2|chr16 (3660788-3660930) | |
| 124-346, gnl|rn3|chr10 (59884795-59884642) | |
| 124-346, gnl|tetNig1|chr7 (1998703-1998856) | |
| 124-346, gnl|xenTro1|scaffold_21 (2080157-2080310) | |
| 352-642, gnl|bosTau2|chr19 (19134852-19134562) | |
| 352-642, gnl|canFam2|chr9 (51033748-51034112) | |
| 352-642, gnl|danRer3|chr5 (26149046-26149395) | |
| 352-642, gnl|dasNov1|scaffold_13617 (5619-5980) | |
| 352-642, gnl|echTel1|scaffold_219181 (8071-8435) | |
| 352-642, gnl|fr1|chrUn (56442617-56442276) | |
| 352-642, gnl|galGal2|chr19 (3049217-3048858) | |
| 352-642, gnl|hg17|chr17 (3790995-3791359) | |
| 352-642, gnl|Hg17|chr17 (3791345-3791055) | |
| 352-642, gnl|loxAfr1|scaffold_18353 (41999-42362) | |
| 352-642, gnl|mm7|chr11 (73062361-73062005) | |
| 352-642, gnl|Mm7|chr11 (73062017-73062307) | |
| 352-642, gnl|monDom2|scaffold_5 (119377245-119377609) | |
| 352-642, gnl|oryCun1|scaffold_213267 (9412-9774) | |
| 352-642, gnl|panTro1|chr19 (4091078-4091442) | |
| 352-642, gnl|rheMac2|chr16 (3660262-3660626) | |
| 352-642, gnl|rn3|chr10 (59885234-59884878) | |
| 352-642, gnl|tetNig1|chr7 (1998192-1998542) | |
| 352-642, gnl|xenTro1|scaffold_21 (2079741-2080091) | |
| 354-637, gnl|bosTau2|chr17 (30347549-30347266) | |
| 354-637, gnl|Hg17|chr12 (109241190-109241473) | |
| 354-637, gnl|Mm7|chr5 (121695192-121694909) |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 124-346, gnl|bosTau2|chr19 (19135246-19135024) | |
| 124-346, gnl|canFam2|chr9 (51034209-51034362) | |
| 124-346, gnl|danRer3|chr5 (26152521-26152674) | |
| 124-346, gnl|dasNov1|scaffold_13617 (6708-6843) | |
| 124-346, gnl|echTel1|scaffold_219181 (8528-8682) | |
| 124-346, gnl|fr1|chrUn (56442208-56442057) | |
| 124-346, gnl|galGal2|chr19 (3048353-3048211) | |
| 124-346, gnl|hg17|chr17 (3791475-3791628) | |
| 124-346, gnl|Hg17|chr17 (3791702-3791480) | |
| 124-346, gnl|loxAfr1|scaffold_18353 (42463-42616) | |
| 124-346, gnl|mm7|chr11 (73061925-73061772) | |
| 124-346, gnl|Mm7|chr11 (73061696-73061918) | |
| 124-346, gnl|monDom2|scaffold_5 (119377886-119378039) | |
| 124-346, gnl|oryCun1|scaffold_213267 (9844-9997) | |
| 124-346, gnl|panTro1|chr19 (4092605-4092748) | |
| 124-346, gnl|rheMac2|chr16 (3660788-3660930) | |
| 124-346, gnl|rn3|chr10 (59884795-59884642) | |
| 124-346, gnl|tetNig1|chr7 (1998703-1998856) | |
| 124-346, gnl|xenTro1|scaffold_21 (2080157-2080310) | |
| 352-642, gnl|bosTau2|chr19 (19134852-19134562) | |
| 352-642, gnl|canFam2|chr9 (51033748-51034112) | |
| 352-642, gnl|danRer3|chr5 (26149046-26149395) | |
| 352-642, gnl|dasNov1|scaffold_13617 (5619-5980) | |
| 352-642, gnl|echTel1|scaffold_219181 (8071-8435) | |
| 352-642, gnl|fr1|chrUn (56442617-56442276) | |
| 352-642, gnl|galGal2|chr19 (3049217-3048858) | |
| 352-642, gnl|hg17|chr17 (3790995-3791359) | |
| 352-642, gnl|Hg17|chr17 (3791345-3791055) | |
| 352-642, gnl|loxAfr1|scaffold_18353 (41999-42362) | |
| 352-642, gnl|mm7|chr11 (73062361-73062005) | |
| 352-642, gnl|Mm7|chr11 (73062017-73062307) | |
| 352-642, gnl|monDom2|scaffold_5 (119377245-119377609) | |
| 352-642, gnl|oryCun1|scaffold_213267 (9412-9774) | |
| 352-642, gnl|panTro1|chr19 (4091078-4091442) | |
| 352-642, gnl|rheMac2|chr16 (3660262-3660626) | |
| 352-642, gnl|rn3|chr10 (59885234-59884878) | |
| 352-642, gnl|tetNig1|chr7 (1998192-1998542) | |
| 352-642, gnl|xenTro1|scaffold_21 (2079741-2080091) | |
| 354-637, gnl|bosTau2|chr17 (30347549-30347266) | |
| 354-637, gnl|Hg17|chr12 (109241190-109241473) | |
| 354-637, gnl|Mm7|chr5 (121695192-121694909) |