Non-Coding RNA Search

Pig4-TMW8001M17

Sequence:


               
               CGCTTCTTAGCGCAGGGCCAAGCACTGCCGCCCACCTCCAGCTGGCAGTCCAGCAGCGGG
ACCGGCCAGGCGCGGCTGGGCGCCTCGGGCGGCTCGCACGGCCTGGTGCGGAGCGACGCC
GGCCACTGGAACGCCCCGTGCCTGGCGGGCAAGGGGAGCAGCGACCTGCTGTGGAGCGGG
GGGGCGCAGTACTCGAGCAGCCTGTGGGGCCCCCCCAGCAGCGACGACGGCAGGGTCATC
GGCAGCCCCACCCCGCTGAACACTCTGCTTCCCGGCGACCTTCTCAGCGGGGAGTCCCTC
TAGCCCGAGGCCGCGTGGGCGCCACCATCATCAGCACGGGGAAGACCCGCCGACCCTCTC
CAGTCCGGGCGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCTTCTTAGCGCAGGGCCAAGCACTGCCGCCCACCTCCAGCTGGCAGTCCAGCAGCGGG
ACCGGCCAGGCGCGGCTGGGCGCCTCGGGCGGCTCGCACGGCCTGGTGCGGAGCGACGCC
GGCCACTGGAACGCCCCGTGCCTGGCGGGCAAGGGGAGCAGCGACCTGCTGTGGAGCGGG
GGGGCGCAGTACTCGAGCAGCCTGTGGGGCCCCCCCAGCAGCGACGACGGCAGGGTCATC
GGCAGCCCCACCCCGCTGAACACTCTGCTTCCCGGCGACCTTCTCAGCGGGGAGTCCCTC
TAGCCCGAGGCCGCGTGGGCGCCACCATCATCAGCACGGGGAAGACCCGCCGACCCTCTC
CAGTCCGGGCGT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               120-239, - strand, RNAz p=0.618153

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               120-239, - strand, RNAz p=0.618153

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-372, gnl|bosTau2|chr19 (47927326-47926952)
               

               
               1-372, gnl|Hg17|chr17 (73612219-73612577)
               

               
               1-372, gnl|Mm7|chr11 (117869594-117869943)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-372, gnl|bosTau2|chr19 (47927326-47926952)
               

               
               1-372, gnl|Hg17|chr17 (73612219-73612577)
               

               
               1-372, gnl|Mm7|chr11 (117869594-117869943)

	1-372, gnl\|bosTau2\|chr19 (47927326-47926952)
	1-372, gnl\|Hg17\|chr17 (73612219-73612577)
	1-372, gnl\|Mm7\|chr11 (117869594-117869943)