Pig4-TMW8002N13
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CGATGATATGAGATGCAGGACTTTTGTACTCAGACTTAGGGCAACACCAGCTGAAAACTT
CAGTTTCTGATCCTTTGGATACATAAGGCTTCTCTATCAGGATCCGGGACAGGGAGGAGG
CCTCATGACCGAAGGTGGGTTTAGAGGGCGCGGGCCAGAGCCCCAGCCCTGACCCTCGGC
CCTGTGCACCTCCTCGGGGGCACAGTCTGATAGCACCGTTACTGGTGCCCGTAGTGTGGT
TGAATCTGGATGGACAAGACAAGCGAAAGAATTTTTTTTTTTTTTTTCCTTCTTAAATGA
AATAGCAGGAAGCTCCTCGGGGGCTTGGGTTTTGAGTAACCCCAGGTGACGGATGCTATA
AATGGATTAACTACCTCAATCCTCACCGTGAGATTAGAACCAAGGGCTGGGACTAGCGTC
AGGGGATGAATCCCGGCCAGGAGGAGTGAGCTGAGGCTTGTGCCGCCGAAGGTTTGTCCT
CGAAGACTAGGCACTCATCGTTGGGTTGGGGG
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Blue-coloured subsequences are predicted RNA structures by RNAz
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CGATGATATGAGATGCAGGACTTTTGTACTCAGACTTAGGGCAACACCAGCTGAAAACTT
CAGTTTCTGATCCTTTGGATACATAAGGCTTCTCTATCAGGATCCGGGACAGGGAGGAGG
CCTCATGACCGAAGGTGGGTTTAGAGGGCGCGGGCCAGAGCCCCAGCCCTGACCCTCGGC
CCTGTGCACCTCCTCGGGGGCACAGTCTGATAGCACCGTTACTGGTGCCCGTAGTGTGGT
TGAATCTGGATGGACAAGACAAGCGAAAGAATTTTTTTTTTTTTTTTCCTTCTTAAATGA
AATAGCAGGAAGCTCCTCGGGGGCTTGGGTTTTGAGTAACCCCAGGTGACGGATGCTATA
AATGGATTAACTACCTCAATCCTCACCGTGAGATTAGAACCAAGGGCTGGGACTAGCGTC
AGGGGATGAATCCCGGCCAGGAGGAGTGAGCTGAGGCTTGTGCCGCCGAAGGTTTGTCCT
CGAAGACTAGGCACTCATCGTTGGGTTGGGGG
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94-186, - strand, RNAz p=0.982205 |
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137-296, - strand, RNAz p=0.998821 |
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255-358, - strand, RNAz p=0.917637 |
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329-442, - strand, RNAz p=0.52244 |
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371-493, + strand, RNAz p=0.970202 |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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94-186, - strand, RNAz p=0.982205 |
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137-296, - strand, RNAz p=0.998821 |
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255-358, - strand, RNAz p=0.917637 |
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329-442, - strand, RNAz p=0.52244 |
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371-493, + strand, RNAz p=0.970202 |
Human gene identifier and UTR site,
human gene reading direction
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21-493, gnl|bosTau2|chr19 (30295688-30295229) |
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21-493, gnl|canFam2|chr9 (28571552-28572345) |
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21-493, gnl|dasNov1|scaffold_6663 (67177-68029) |
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21-493, gnl|hg17|chr17 (44486322-44487144) |
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21-493, gnl|Hg17|chr17 (44486398-44486852) |
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21-493, gnl|mm7|chr11 (96068183-96067402) |
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21-493, gnl|Mm7|chr11 (96068105-96067690) |
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21-493, gnl|monDom2|scaffold_18 (45056340-45055399) |
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21-493, gnl|oryCun1|scaffold_205042 (988-215) |
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21-493, gnl|panTro1|chr19_random (43445458-43446280) |
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21-493, gnl|rheMac2|chr16 (33288638-33289441) |
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21-493, gnl|rn3|chr10 (84681241-84680493) |
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24-491, gnl|bosTau2|chr1 (20134369-20133902) |
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24-491, gnl|Hg17|chr3 (88361923-88362359) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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21-493, gnl|bosTau2|chr19 (30295688-30295229) |
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21-493, gnl|canFam2|chr9 (28571552-28572345) |
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21-493, gnl|dasNov1|scaffold_6663 (67177-68029) |
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21-493, gnl|hg17|chr17 (44486322-44487144) |
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21-493, gnl|Hg17|chr17 (44486398-44486852) |
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21-493, gnl|mm7|chr11 (96068183-96067402) |
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21-493, gnl|Mm7|chr11 (96068105-96067690) |
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21-493, gnl|monDom2|scaffold_18 (45056340-45055399) |
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21-493, gnl|oryCun1|scaffold_205042 (988-215) |
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21-493, gnl|panTro1|chr19_random (43445458-43446280) |
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21-493, gnl|rheMac2|chr16 (33288638-33289441) |
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21-493, gnl|rn3|chr10 (84681241-84680493) |
| |
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24-491, gnl|bosTau2|chr1 (20134369-20133902) |
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24-491, gnl|Hg17|chr3 (88361923-88362359) |
