Pig4-TMW8002P19
|
CATGTGCCCAATTTGTCTCAATTTTTTTTGAAATGTTAGTCAATGTTTGGTAACTAGGGA
CTCTATGTTAGTCTGTTTTTCTCTGCCCAATAAAATAGATGCACTTCTCTCTGAATTTGA
ATGTATGCAAAAAATGAACAATTGTACAGCAAACTTCATAAATTTTATATGTGGTAGTCT
TGCCTAATTATTTTATAAACTTTCTGAGGAGGGACTTTGTTTTATTGGTATGTTTTAATA
TCTGAGGGCACCAAAATAGTTTTCAGTAAATATTTAAATTGAACTAAGCTGCTAGATCAT
TGTTCATTCATGAATTTGGATTACCTGTGAATTAATAAGAAAAGTTAGTGATTGTTGTAA
TTGTTGTTTATTAAATTTCATTGGCGTAAATGTCCATGCCAATAATTTACAGAATGAGTA
ACACAAGAATTTTATAAACTGAGCTAACTCCCTACCTATTCTCTAATAAAAGTTTTACAA
AATATTTAGAATAAAATTAGAATTTATATCATCTGCAGAGTAAGTTGAAAGTATAAGGCA
GAATGGAATTAAAAGTGATGAAAAATCATTTTTAAGCTTGACAAACATTTAGCTTTCTGA
GGTTGATTTCATATGTAAGATTATCAGAACAGAATCTCATTATGCCAGTTAACCCCTGAG
TATCAAAAACTGCTTGGATTTTCAAAGCATTTGT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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CATGTGCCCAATTTGTCTCAATTTTTTTTGAAATGTTAGTCAATGTTTGGTAACTAGGGA
CTCTATGTTAGTCTGTTTTTCTCTGCCCAATAAAATAGATGCACTTCTCTCTGAATTTGA
ATGTATGCAAAAAATGAACAATTGTACAGCAAACTTCATAAATTTTATATGTGGTAGTCT
TGCCTAATTATTTTATAAACTTTCTGAGGAGGGACTTTGTTTTATTGGTATGTTTTAATA
TCTGAGGGCACCAAAATAGTTTTCAGTAAATATTTAAATTGAACTAAGCTGCTAGATCAT
TGTTCATTCATGAATTTGGATTACCTGTGAATTAATAAGAAAAGTTAGTGATTGTTGTAA
TTGTTGTTTATTAAATTTCATTGGCGTAAATGTCCATGCCAATAATTTACAGAATGAGTA
ACACAAGAATTTTATAAACTGAGCTAACTCCCTACCTATTCTCTAATAAAAGTTTTACAA
AATATTTAGAATAAAATTAGAATTTATATCATCTGCAGAGTAAGTTGAAAGTATAAGGCA
GAATGGAATTAAAAGTGATGAAAAATCATTTTTAAGCTTGACAAACATTTAGCTTTCTGA
GGTTGATTTCATATGTAAGATTATCAGAACAGAATCTCATTATGCCAGTTAACCCCTGAG
TATCAAAAACTGCTTGGATTTTCAAAGCATTTGT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
87-191, gnl|bosTau2|chr1 (30191501-30191398) |
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87-191, gnl|canFam2|chr33 (26557799-26557980) |
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87-191, gnl|dasNov1|scaffold_58848 (6745-6573) |
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87-191, gnl|hg17|chr3 (121103342-121103553) |
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87-191, gnl|Hg17|chr3 (121103469-121103362) |
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87-191, gnl|panTro1|chr2 (122825953-122826165) |
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87-191, gnl|rheMac2|chr2 (39933727-39933940) |
| |
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197-694, gnl|bosTau2|chr1 (30191141-30190624) |
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197-694, gnl|dasNov1|scaffold_58848 (7415-6790) |
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197-694, gnl|hg17|chr3 (121102721-121103293) |
|
197-694, gnl|Hg17|chr3 (121103333-121102821) |
|
197-694, gnl|panTro1|chr2 (122825332-122825904) |
|
197-694, gnl|rheMac2|chr2 (39933115-39933679) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
87-191, gnl|bosTau2|chr1 (30191501-30191398) |
|
87-191, gnl|canFam2|chr33 (26557799-26557980) |
|
87-191, gnl|dasNov1|scaffold_58848 (6745-6573) |
|
87-191, gnl|hg17|chr3 (121103342-121103553) |
|
87-191, gnl|Hg17|chr3 (121103469-121103362) |
|
87-191, gnl|panTro1|chr2 (122825953-122826165) |
|
87-191, gnl|rheMac2|chr2 (39933727-39933940) |
| |
|
197-694, gnl|bosTau2|chr1 (30191141-30190624) |
|
197-694, gnl|dasNov1|scaffold_58848 (7415-6790) |
|
197-694, gnl|hg17|chr3 (121102721-121103293) |
|
197-694, gnl|Hg17|chr3 (121103333-121102821) |
|
197-694, gnl|panTro1|chr2 (122825332-122825904) |
|
197-694, gnl|rheMac2|chr2 (39933115-39933679) |
