Non-Coding RNA Search

Pig4-TMW8003I10

Sequence:


               
               GTTTGGAGCCTCAGGCGCAGCCCTGGTGTCACGCTGGCTTCCCCAAGGAAAACTCAAGGC
CGCTGGTGCAAGGCCACTGGCTGCCTGCTTGGCATCACCCAAGGGATGTGTCTTCACCTG
CACTCCCACCCCGCGTGCTGAGCATGAACCGCAGGTTTGTTTGAACACAGCCCTGCTGGA
CCTCCCGATCCAGCCGACCACCGAGGTCCTGGGGTTTGGTCTCGGCTCCTCCTCCAGCCA
GCACCTGCCTTTCCGCTTCTATGACCAGTGCCGCCGAGGCAGCAGCGACCCCACCGTACA
GCGCTCCGTGTTCGCCTCCGTGGACAAGGTGCCAGGCTTCGCTGTGGCCCAGTGCATAAA
CCAGCACAGCTCGTCCTCCCTGTCCTCGCCGTCACCTTCTGCCAGTGGGAGCCCCAGCGG
CAGCGGGAGTACCAGCCACTGCGACTCAGGGGGTGCCAGCTCGTCGTCCACCCCCTCTGC
TGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTGGAGCCTCAGGCGCAGCCCTGGTGTCACGCTGGCTTCCCCAAGGAAAACTCAAGGC
CGCTGGTGCAAGGCCACTGGCTGCCTGCTTGGCATCACCCAAGGGATGTGTCTTCACCTG
CACTCCCACCCCGCGTGCTGAGCATGAACCGCAGGTTTGTTTGAACACAGCCCTGCTGGA
CCTCCCGATCCAGCCGACCACCGAGGTCCTGGGGTTTGGTCTCGGCTCCTCCTCCAGCCA
GCACCTGCCTTTCCGCTTCTATGACCAGTGCCGCCGAGGCAGCAGCGACCCCACCGTACA
GCGCTCCGTGTTCGCCTCCGTGGACAAGGTGCCAGGCTTCGCTGTGGCCCAGTGCATAAA
CCAGCACAGCTCGTCCTCCCTGTCCTCGCCGTCACCTTCTGCCAGTGGGAGCCCCAGCGG
CAGCGGGAGTACCAGCCACTGCGACTCAGGGGGTGCCAGCTCGTCGTCCACCCCCTCTGC
TGC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|55643419|ref|XP_510816.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55643419|ref|XP_510816.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               145-258, - strand, RNAz p=0.597405

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               145-258, - strand, RNAz p=0.597405

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               108-336, gnl|bosTau2|chr25 (9246494-9246266)
               

               
               108-336, gnl|Hg17|chr16 (11127276-11127505)
               

               
               108-336, gnl|Mm7|chr16 (10372092-10372328)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               108-336, gnl|bosTau2|chr25 (9246494-9246266)
               

               
               108-336, gnl|Hg17|chr16 (11127276-11127505)
               

               
               108-336, gnl|Mm7|chr16 (10372092-10372328)

	108-336, gnl\|bosTau2\|chr25 (9246494-9246266)
	108-336, gnl\|Hg17\|chr16 (11127276-11127505)
	108-336, gnl\|Mm7\|chr16 (10372092-10372328)