Non-Coding RNA Search

Pig4-TMW8010A02

Sequence:


               
               GGGTCCCCATCACCCCCACCCGGGGCGCCAGCAGCAGAGTGGCTGTCCAGAGGGGCATAG
GCCCCGGGCCACATCCACCTGACACACAGCGACCCCCTCCCGGCAAAGCAGCCTTCAAAC
CCAGGATTTCAGACGTCAGAGTCATGAATGGTACCGGCCTGGAGCTGAGCGCGGAGGGCT
CCCCAGGCTCCCCCACCCTGGACATCGATCAGTCCATTGAGCAGCTCAACAGGCTGATCT
TGGAGCTGGACCCCACCTTTGAGCCCATCCCCACCCACATGACCATGCCGGGCAGCCAGG
CCAACAGCCCTGCGCCCCCGGACGGCGTGGGAGGCGGGCTGCGGGCCAGCGGGCGCCTGC
AGGACGCAGGAGATGGCCCCGGCCGGGCCCCCACGCGGCAAGGTGACGAGCCGCTGGGCG
GAAGATTCCGGAAGCTGAGCCTTGGGCAGTATGACAACGATGCTGGGGGGCAGCCGGCCT
TCTCCAAGTGCGGCTGGGGGAAACCCACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGTCCCCATCACCCCCACCCGGGGCGCCAGCAGCAGAGTGGCTGTCCAGAGGGGCATAG
GCCCCGGGCCACATCCACCTGACACACAGCGACCCCCTCCCGGCAAAGCAGCCTTCAAAC
CCAGGATTTCAGACGTCAGAGTCATGAATGGTACCGGCCTGGAGCTGAGCGCGGAGGGCT
CCCCAGGCTCCCCCACCCTGGACATCGATCAGTCCATTGAGCAGCTCAACAGGCTGATCT
TGGAGCTGGACCCCACCTTTGAGCCCATCCCCACCCACATGACCATGCCGGGCAGCCAGG
CCAACAGCCCTGCGCCCCCGGACGGCGTGGGAGGCGGGCTGCGGGCCAGCGGGCGCCTGC
AGGACGCAGGAGATGGCCCCGGCCGGGCCCCCACGCGGCAAGGTGACGAGCCGCTGGGCG
GAAGATTCCGGAAGCTGAGCCTTGGGCAGTATGACAACGATGCTGGGGGGCAGCCGGCCT
TCTCCAAGTGCGGCTGGGGGAAACCCACC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               120-319, - strand, RNAz p=0.937696

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               120-319, - strand, RNAz p=0.937696

Predicted microRNA(s): 1 entry(ies)

More info

Predicted microRNA(s): 1 entry(ies)

Help | Less info


               
               25-122, - strand, RNAmicro p=0.999605

Predicted microRNA(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               25-122, - strand, RNAmicro p=0.999605

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-406, gnl|bosTau2|chr4 (44323644-44324049)
               

               
               1-406, gnl|Hg17|chr7 (47181600-47181198)
               

               
               1-406, gnl|Mm7|chr11 (8444487-8444097)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-406, gnl|bosTau2|chr4 (44323644-44324049)
               

               
               1-406, gnl|Hg17|chr7 (47181600-47181198)
               

               
               1-406, gnl|Mm7|chr11 (8444487-8444097)

	1-406, gnl\|bosTau2\|chr4 (44323644-44324049)
	1-406, gnl\|Hg17\|chr7 (47181600-47181198)
	1-406, gnl\|Mm7\|chr11 (8444487-8444097)