Non-Coding RNA Search

Pig4-TMW8010I20

Sequence:


               
               CTTTTCTTCCCAGGAAGAAGATGGACTGAAAGCTACCAGTTGGGGACTTGGTGTGATCAG
GGCACTGCTGGGTTTTAAAGGAGGTGATGGGGCTTGCGCTGACTCGTCTTCCCACCCAAG
TGAAGAGTTGTTGATGTTCACTGGTTATGCTTGGACAATGTGCAGTTTGTTTTAATTTAA
AATTTGGTGGGGGATAGGGGTAGAGGCTTGTGAAGGGTCCGGATCCGGTGGACCTCCTCT
TTGTCCCTAGTAGGAGAGACACCCCCAAGTCTGTCCTCGATGCCGTCAGCCTTGGCCATC
TTCACTTGCCGCCAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTTCTTCCCAGGAAGAAGATGGACTGAAAGCTACCAGTTGGGGACTTGGTGTGATCAG
GGCACTGCTGGGTTTTAAAGGAGGTGATGGGGCTTGCGCTGACTCGTCTTCCCACCCAAG
TGAAGAGTTGTTGATGTTCACTGGTTATGCTTGGACAATGTGCAGTTTGTTTTAATTTAA
AATTTGGTGGGGGATAGGGGTAGAGGCTTGTGAAGGGTCCGGATCCGGTGGACCTCCTCT
TTGTCCCTAGTAGGAGAGACACCCCCAAGTCTGTCCTCGATGCCGTCAGCCTTGGCCATC
TTCACTTGCCGCCAAAAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               158-271, + strand, RNAz p=0.799697

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               158-271, + strand, RNAz p=0.799697

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of AK124200, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of AK124200, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-311, gnl|bosTau2|chr22 (31488208-31488526)
               

               
               1-311, gnl|Hg17|chr3 (57718140-57718450)
               

               
               1-311, gnl|Mm7|chr14 (23924570-23924261)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-311, gnl|bosTau2|chr22 (31488208-31488526)
               

               
               1-311, gnl|Hg17|chr3 (57718140-57718450)
               

               
               1-311, gnl|Mm7|chr14 (23924570-23924261)

	1-311, gnl\|bosTau2\|chr22 (31488208-31488526)
	1-311, gnl\|Hg17\|chr3 (57718140-57718450)
	1-311, gnl\|Mm7\|chr14 (23924570-23924261)