Pig4-TMW8010K24
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GATCTCTGCATCAACTGCTACAACACGAAGAGCCACACCCATAAGATGGTGAAGTGGGGG
CTGGGCCTGGACGACGAGGGCAGCAGCCAGGGCGAGCCGCAGTCCAAGAGTCCCCAGGAG
TCGCGGCGCCTGAGCATCCAGCGCTGCATCCAGTCCCTGGTGCACGCCTGCCAGTGCCGC
GAGCGCCAACTGCTCGCTGCCGTCCTGCCAGAAGATGAAGCGGGTGGTGCAGCACACCAA
GGGCTGCAAGCGCAAGACCAATGGCGGCTGCCCGGTGTGCAAGCAGCTCATTGCCCTCTG
CTGCTACCACGCCAAACACTGCCAAGAAAACAAGTGCCCCGTGCCCTTCTGCCTCAACAT
CAAACACAAGCTCCGCCAGCAGCAGATCCAGCACCGCCTGCAGCAGGCCCAGCTCATGCG
CCGGCGGATGGCCACCATGAACACCCGCAACGTGCCTCAGCAGAGCCTGCCATCCNCTAC
CTCAGCGCCGCCCGGGACCCCCACGCAGCAGCCCAGCACGCCCCAGACGCCGC
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GATCTCTGCATCAACTGCTACAACACGAAGAGCCACACCCATAAGATGGTGAAGTGGGGG
CTGGGCCTGGACGACGAGGGCAGCAGCCAGGGCGAGCCGCAGTCCAAGAGTCCCCAGGAG
TCGCGGCGCCTGAGCATCCAGCGCTGCATCCAGTCCCTGGTGCACGCCTGCCAGTGCCGC
GAGCGCCAACTGCTCGCTGCCGTCCTGCCAGAAGATGAAGCGGGTGGTGCAGCACACCAA
GGGCTGCAAGCGCAAGACCAATGGCGGCTGCCCGGTGTGCAAGCAGCTCATTGCCCTCTG
CTGCTACCACGCCAAACACTGCCAAGAAAACAAGTGCCCCGTGCCCTTCTGCCTCAACAT
CAAACACAAGCTCCGCCAGCAGCAGATCCAGCACCGCCTGCAGCAGGCCCAGCTCATGCG
CCGGCGGATGGCCACCATGAACACCCGCAACGTGCCTCAGCAGAGCCTGCCATCCNCTAC
CTCAGCGCCGCCCGGGACCCCCACGCAGCAGCCCAGCACGCCCCAGACGCCGC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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284-392, - strand, RNAmicro p=0.993581 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
284-392, - strand, RNAmicro p=0.993581 |
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1-533, gnl|bosTau2|chr25 (640567-640036) |
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1-533, gnl|canFam2|chr6 (40574556-40573980) |
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1-533, gnl|danRer3|chrNA (36744352-36744952) |
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1-533, gnl|dasNov1|scaffold_8487 (9166-8582) |
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1-533, gnl|echTel1|scaffold_309684 (42175-42760) |
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1-533, gnl|fr1|chrUn (56331329-56331920) |
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1-533, gnl|galGal2|chr1 (46498264-46498867) |
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1-533, gnl|hg17|chr16 (3719311-3719887) |
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1-533, gnl|Hg17|chr16 (3719870-3719339) |
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1-533, gnl|loxAfr1|scaffold_2198 (69852-69263) |
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1-533, gnl|mm7|chr16 (3757198-3757774) |
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1-533, gnl|Mm7|chr16 (3757757-3757226) |
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1-533, gnl|monDom2|scaffold_49 (5186928-5186352) |
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1-533, gnl|oryCun1|scaffold_174231 (23346-22770) |
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1-533, gnl|panTro1|chr18 (3585607-3586183) |
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1-533, gnl|rheMac2|chr20 (3860486-3861062) |
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1-533, gnl|rn3|chr10 (11721194-11720618) |
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1-533, gnl|tetNig1|chr3 (9715037-9715628) |
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1-533, gnl|xenTro1|scaffold_12 (2719659-2719090) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-533, gnl|bosTau2|chr25 (640567-640036) |
|
1-533, gnl|canFam2|chr6 (40574556-40573980) |
|
1-533, gnl|danRer3|chrNA (36744352-36744952) |
|
1-533, gnl|dasNov1|scaffold_8487 (9166-8582) |
|
1-533, gnl|echTel1|scaffold_309684 (42175-42760) |
|
1-533, gnl|fr1|chrUn (56331329-56331920) |
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1-533, gnl|galGal2|chr1 (46498264-46498867) |
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1-533, gnl|hg17|chr16 (3719311-3719887) |
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1-533, gnl|Hg17|chr16 (3719870-3719339) |
|
1-533, gnl|loxAfr1|scaffold_2198 (69852-69263) |
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1-533, gnl|mm7|chr16 (3757198-3757774) |
|
1-533, gnl|Mm7|chr16 (3757757-3757226) |
|
1-533, gnl|monDom2|scaffold_49 (5186928-5186352) |
|
1-533, gnl|oryCun1|scaffold_174231 (23346-22770) |
|
1-533, gnl|panTro1|chr18 (3585607-3586183) |
|
1-533, gnl|rheMac2|chr20 (3860486-3861062) |
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1-533, gnl|rn3|chr10 (11721194-11720618) |
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1-533, gnl|tetNig1|chr3 (9715037-9715628) |
|
1-533, gnl|xenTro1|scaffold_12 (2719659-2719090) |
