Non-Coding RNA Search

Pig4-TMW8010O15

Sequence:


               
               CTCTTTCTTGCACTCTGACCTGAATTATAAACTATTTCGTTAGAAAACATTTCTGTCCCT
CCTCCTTCTGGAGCTCCACCAGCACTTCCTCTTCCACCACTTCTCCCAGTGAGCACTGTG
ATAGGTGAGACTGCATAACCATTGGAGTGATTGAACTCACTTTGCATAATTCACAGTAAA
CTCCTCTGTTAGACTGTTGGTTTTTATAGTTATTAGGTTGTAGGTGGTAATACAAAGTTT
AAAGCATTAAATCTAATTCAGCACTAATTTCTTCTGGTGAAAGGCCTCTGAAGTTACACA
GAAACGTCTCTGTGATGTCAAATGCTTCTATACCTAGTTTATAACCAATTTAATGTGGTT
TACATTTGTTTTGGTTAGATTTTTCTAGGAGAATTATAGCAGTGATTGTTCAAAAAAAAT
TTTTTTATTAATAATGCAATAATGCCATTTTTAAAAAGTGAAACTTGATTTGGAACTCCC
TGGTACATACAGCAGTCAAGGTAGTTGTGTGAACGTGAGGGACAGGAGGAAGAAAAATGA
AAAAGAAAATGATGTAATATGTGATTGCTCTGAGGCTTTCCTATGGATCTACAGTTGAAA
AACTCTGATACAACCCAGTACTTATGGCATCTGAAGATGACATAAAAATTTTTTTTTTCA
ATAAAATAAGTTTAAATTGTCCCCAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCTTTCTTGCACTCTGACCTGAATTATAAACTATTTCGTTAGAAAACATTTCTGTCCCT
CCTCCTTCTGGAGCTCCACCAGCACTTCCTCTTCCACCACTTCTCCCAGTGAGCACTGTG
ATAGGTGAGACTGCATAACCATTGGAGTGATTGAACTCACTTTGCATAATTCACAGTAAA
CTCCTCTGTTAGACTGTTGGTTTTTATAGTTATTAGGTTGTAGGTGGTAATACAAAGTTT
AAAGCATTAAATCTAATTCAGCACTAATTTCTTCTGGTGAAAGGCCTCTGAAGTTACACA
GAAACGTCTCTGTGATGTCAAATGCTTCTATACCTAGTTTATAACCAATTTAATGTGGTT
TACATTTGTTTTGGTTAGATTTTTCTAGGAGAATTATAGCAGTGATTGTTCAAAAAAAAT
TTTTTTATTAATAATGCAATAATGCCATTTTTAAAAAGTGAAACTTGATTTGGAACTCCC
TGGTACATACAGCAGTCAAGGTAGTTGTGTGAACGTGAGGGACAGGAGGAAGAAAAATGA
AAAAGAAAATGATGTAATATGTGATTGCTCTGAGGCTTTCCTATGGATCTACAGTTGAAA
AACTCTGATACAACCCAGTACTTATGGCATCTGAAGATGACATAAAAATTTTTTTTTTCA
ATAAAATAAGTTTAAATTGTCCCCAAAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               1-120, - strand, RNAz p=0.952672

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-120, - strand, RNAz p=0.952672

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-685, gnl|bosTau2|chr13 (9277064-9276407)
               

               
               1-685, gnl|Hg17|chr10 (27092939-27092290)
               

               
               1-685, gnl|Mm7|chr2 (22963525-22962937)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-685, gnl|bosTau2|chr13 (9277064-9276407)
               

               
               1-685, gnl|Hg17|chr10 (27092939-27092290)
               

               
               1-685, gnl|Mm7|chr2 (22963525-22962937)

	1-685, gnl\|bosTau2\|chr13 (9277064-9276407)
	1-685, gnl\|Hg17\|chr10 (27092939-27092290)
	1-685, gnl\|Mm7\|chr2 (22963525-22962937)