Pig4-TMW8010O20
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTTTCAGCATCAGTATACAGTCTGGCTTTGAAGCCATGAGTCAGGAACTGTGCATAGTAA TGTGCTTAAAGGACTTAACCAGCATTGTTGACATAAAAACTTCAAGCCGACCTGCCATGA TTGGCAGTTTGACAGATGGTTCCACAGAAACCTTTTGGGAATCAGGAGATGAGGATAAGA ACAAAACCAAGAATATCACCATCAACTGTGTAAAGGGAATCAATGCCCGCTATGTCTCTG TTCATGTGGACAATTCCCGAGATCTTGGGAATAAAGTTACCTCAATGACCTTCTTAACTG GCAAAGCAGTAGAAGATTTATGCAGAATAAAGCAGGTTGACCTAGATTCCAGGCACATTG GCTGGGTAACAAGTGAACTTCCCGGAGGGGATAATCACATCATCAAAATTGAATTAAAGG GCCCGGAAAATACACTGAGAGTTCGACAAGTTAAGGTTCTGGGCTGGAAGGATGGCGAAA GCACTAAAATTGCTGGCCAAATTTCAGCCAGTGTGGCCCAGCAGAGGAACTGTGAAGCTG AGACTCTGCGAGTGTTCAGACTTATTACATCACAAGTATTTGGAAAGCTTATCTCTGGAG ATGCTGAACCAACCCCGTAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTTTCAGCATCAGTATACAGTCTGGCTTTGAAGCCATGAGTCAGGAACTGTGCATAGTAA TGTGCTTAAAGGACTTAACCAGCATTGTTGACATAAAAACTTCAAGCCGACCTGCCATGA TTGGCAGTTTGACAGATGGTTCCACAGAAACCTTTTGGGAATCAGGAGATGAGGATAAGA ACAAAACCAAGAATATCACCATCAACTGTGTAAAGGGAATCAATGCCCGCTATGTCTCTG TTCATGTGGACAATTCCCGAGATCTTGGGAATAAAGTTACCTCAATGACCTTCTTAACTG GCAAAGCAGTAGAAGATTTATGCAGAATAAAGCAGGTTGACCTAGATTCCAGGCACATTG GCTGGGTAACAAGTGAACTTCCCGGAGGGGATAATCACATCATCAAAATTGAATTAAAGG GCCCGGAAAATACACTGAGAGTTCGACAAGTTAAGGTTCTGGGCTGGAAGGATGGCGAAA GCACTAAAATTGCTGGCCAAATTTCAGCCAGTGTGGCCCAGCAGAGGAACTGTGAAGCTG AGACTCTGCGAGTGTTCAGACTTATTACATCACAAGTATTTGGAAAGCTTATCTCTGGAG ATGCTGAACCAACCCCGTAAAA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 413-572, + strand, RNAz p=0.950737 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 413-572, + strand, RNAz p=0.950737 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 43-285, gnl|bosTau2|chr12 (26132209-26132453) | |
| 43-285, gnl|Hg17|chr13 (76553789-76553545) | |
| 43-285, gnl|Mm7|chr14 (97575447-97575203) | |
| 334-577, gnl|bosTau2|chr12 (26136031-26136274) | |
| 334-577, gnl|canFam2|chr22 (33590250-33590547) | |
| 334-577, gnl|danRer3|chr7 (47418085-47418356) | |
| 334-577, gnl|dasNov1|scaffold_73078 (3670-3964) | |
| 334-577, gnl|echTel1|scaffold_308399 (3357-3650) | |
| 334-577, gnl|fr1|chrUn (155225526-155225809) | |
| 334-577, gnl|galGal2|chr1 (151125007-151124704) | |
| 334-577, gnl|hg17|chr13 (76549275-76549570) | |
| 334-577, gnl|Hg17|chr13 (76549525-76549282) | |
| 334-577, gnl|loxAfr1|scaffold_10956 (1172-877) | |
| 334-577, gnl|mm7|chr14 (97571705-97571999) | |
| 334-577, gnl|Mm7|chr14 (97571955-97571712) | |
| 334-577, gnl|monDom2|scaffold_8 (14686697-14686992) | |
| 334-577, gnl|oryCun1|scaffold_153389 (5965-5670) | |
| 334-577, gnl|panTro1|chr14 (59125618-59125913) | |
| 334-577, gnl|rheMac2|chr17 (57565557-57565852) | |
| 334-577, gnl|rn3|chr15 (87162742-87163036) | |
| 334-577, gnl|tetNig1|chr2 (8189818-8190088) | |
| 334-577, gnl|xenTro1|scaffold_141 (1867722-1867409) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 43-285, gnl|bosTau2|chr12 (26132209-26132453) | |
| 43-285, gnl|Hg17|chr13 (76553789-76553545) | |
| 43-285, gnl|Mm7|chr14 (97575447-97575203) | |
| 334-577, gnl|bosTau2|chr12 (26136031-26136274) | |
| 334-577, gnl|canFam2|chr22 (33590250-33590547) | |
| 334-577, gnl|danRer3|chr7 (47418085-47418356) | |
| 334-577, gnl|dasNov1|scaffold_73078 (3670-3964) | |
| 334-577, gnl|echTel1|scaffold_308399 (3357-3650) | |
| 334-577, gnl|fr1|chrUn (155225526-155225809) | |
| 334-577, gnl|galGal2|chr1 (151125007-151124704) | |
| 334-577, gnl|hg17|chr13 (76549275-76549570) | |
| 334-577, gnl|Hg17|chr13 (76549525-76549282) | |
| 334-577, gnl|loxAfr1|scaffold_10956 (1172-877) | |
| 334-577, gnl|mm7|chr14 (97571705-97571999) | |
| 334-577, gnl|Mm7|chr14 (97571955-97571712) | |
| 334-577, gnl|monDom2|scaffold_8 (14686697-14686992) | |
| 334-577, gnl|oryCun1|scaffold_153389 (5965-5670) | |
| 334-577, gnl|panTro1|chr14 (59125618-59125913) | |
| 334-577, gnl|rheMac2|chr17 (57565557-57565852) | |
| 334-577, gnl|rn3|chr15 (87162742-87163036) | |
| 334-577, gnl|tetNig1|chr2 (8189818-8190088) | |
| 334-577, gnl|xenTro1|scaffold_141 (1867722-1867409) |