Non-Coding RNA Search

Pig4-TMW8011D11

Sequence:


               
               AGGGCAAGCTCTACCCCATCCTGGACACATGCTGGCACGAACGGGGTAGCAACTCCCTGC
CCATGGTGCTGCCCCTGCCCAGCGGGCCAGGCCACCTCACCCCCTCGCAGCCCACCAAGC
TCTAGCGTTGCTTGCAGGGGCTGCCTTCCCAGCTGGGCCCAGGGGCTCCAGGGTCCCGCT
GGGTCTGGCGAGCAGAGGTGGTGTCTTCATTGTTCAGGGGAGCTCTTCCTGCCTGGGTGT
CGCTAGAAACAGTGACAGGGAGAGAAGGCCCACAGTCCCATCCCCATTAGCCAGGGGCAT
GTTTATCAAGCTCTCTCCAGGCTGGTATCAACCTGCGCATTAACTGGCAGAGGAAGGCCT
TGGTGTCTGCGGGTCACGCTGGGTTCCCTTGGTGCCTCCCGGCCACAATCTCTGCTTATT
CTTCCGCCTTAAGGTAGAAACACTTCCGCCCATAATTTCCCCCATCATTGTGAACTTTAA
ATAACTTAAAGGATAATAAATTTGACATTATTTCTTCCTCCTCAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGGCAAGCTCTACCCCATCCTGGACACATGCTGGCACGAACGGGGTAGCAACTCCCTGC
CCATGGTGCTGCCCCTGCCCAGCGGGCCAGGCCACCTCACCCCCTCGCAGCCCACCAAGC
TCTAGCGTTGCTTGCAGGGGCTGCCTTCCCAGCTGGGCCCAGGGGCTCCAGGGTCCCGCT
GGGTCTGGCGAGCAGAGGTGGTGTCTTCATTGTTCAGGGGAGCTCTTCCTGCCTGGGTGT
CGCTAGAAACAGTGACAGGGAGAGAAGGCCCACAGTCCCATCCCCATTAGCCAGGGGCAT
GTTTATCAAGCTCTCTCCAGGCTGGTATCAACCTGCGCATTAACTGGCAGAGGAAGGCCT
TGGTGTCTGCGGGTCACGCTGGGTTCCCTTGGTGCCTCCCGGCCACAATCTCTGCTTATT
CTTCCGCCTTAAGGTAGAAACACTTCCGCCCATAATTTCCCCCATCATTGTGAACTTTAA
ATAACTTAAAGGATAATAAATTTGACATTATTTCTTCCTCCTCAAAAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               40-264, + strand, RNAz p=0.994521

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               40-264, + strand, RNAz p=0.994521

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of AY081949, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of AY081949, +

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-395, gnl|bosTau2|chr25 (28285038-28285401)
               

               
               1-395, gnl|Hg17|chr7 (72171692-72171330)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-395, gnl|bosTau2|chr25 (28285038-28285401)
               

               
               1-395, gnl|Hg17|chr7 (72171692-72171330)

	1-395, gnl\|bosTau2\|chr25 (28285038-28285401)
	1-395, gnl\|Hg17\|chr7 (72171692-72171330)