Pig4-TMW8014L24
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AAAGTAGAGACTGTCCCTAAAGAGGATCTGGACTTGCCAAATCACTTGGTGGGTNTGAAG
CGAAATTACATTAAGCTGTCCTTCAACACTGTGGAGGACCTTGTCAAAGTGAGAAAGGAG
ATCTCCCCAGCTGTGAAGAAAAACCGGGAGCAGGGCCACGCCAGCGATGCCTACACGGCC
ATGCTCTCCAGTGTTCTCCAAGGAGGCAGTGTGGTCATGGATGAAGAGGAAACCTCTAAG
AAGATTGCTGACCAGCTGGACAACATTGTGGATATGCGGGAGTATGATGTGCCCTACCAC
ATCCGCCTCTCCATCGACCTAAAGATCCACGTGGCTCATTGGTACAATGTCCGATACCGA
GGAAATGCCTTTCCAGTGGAAATTGCCCGCCGAGATGACCTGGTTGAACGACCTGACCCT
GTGGTTTTAGCGTTTGACATTGAGACAACCAAACTTCCCCTCAAGTTTCCTGATGCTGAG
ACTGACCAGATTATGATGATTTCCTATATGATTGATGGTCAGGGCTACCTCATCACCAAC
AGGGAGATCGTCTCAGAAGATATAGAAGATTTTGAGTTCACCCCCAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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AAAGTAGAGACTGTCCCTAAAGAGGATCTGGACTTGCCAAATCACTTGGTGGGTNTGAAG
CGAAATTACATTAAGCTGTCCTTCAACACTGTGGAGGACCTTGTCAAAGTGAGAAAGGAG
ATCTCCCCAGCTGTGAAGAAAAACCGGGAGCAGGGCCACGCCAGCGATGCCTACACGGCC
ATGCTCTCCAGTGTTCTCCAAGGAGGCAGTGTGGTCATGGATGAAGAGGAAACCTCTAAG
AAGATTGCTGACCAGCTGGACAACATTGTGGATATGCGGGAGTATGATGTGCCCTACCAC
ATCCGCCTCTCCATCGACCTAAAGATCCACGTGGCTCATTGGTACAATGTCCGATACCGA
GGAAATGCCTTTCCAGTGGAAATTGCCCGCCGAGATGACCTGGTTGAACGACCTGACCCT
GTGGTTTTAGCGTTTGACATTGAGACAACCAAACTTCCCCTCAAGTTTCCTGATGCTGAG
ACTGACCAGATTATGATGATTTCCTATATGATTGATGGTCAGGGCTACCTCATCACCAAC
AGGGAGATCGTCTCAGAAGATATAGAAGATTTTGAGTTCACCCCCAAAAA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
36-191, gnl|bosTau2|chr17 (23102545-23102390) |
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36-191, gnl|canFam2|chr26 (3437819-3437577) |
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36-191, gnl|danRer3|chrNA (72863761-72863521) |
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36-191, gnl|dasNov1|scaffold_35663 (1900-1696) |
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36-191, gnl|echTel1|scaffold_247431 (331-81) |
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36-191, gnl|fr1|chrUn (1643337-1643551) |
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36-191, gnl|galGal2|chr15 (9925610-9925892) |
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36-191, gnl|hg17|chr12 (131866407-131866652) |
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36-191, gnl|Hg17|chr12 (131866588-131866433) |
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36-191, gnl|loxAfr1|scaffold_89506 (4773-4519) |
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36-191, gnl|mm7|chr5 (109457664-109457434) |
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36-191, gnl|Mm7|chr5 (109457481-109457636) |
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36-191, gnl|monDom2|scaffold_54 (1315649-1315881) |
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36-191, gnl|oryCun1|scaffold_208047 (79657-79889) |
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36-191, gnl|panTro1|chr10 (134723484-134723729) |
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36-191, gnl|rheMac2|chr11 (133976395-133976640) |
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36-191, gnl|rn3|chr12 (46401825-46402055) |
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36-191, gnl|tetNig1|chr12 (6238105-6238308) |
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36-191, gnl|xenTro1|scaffold_207 (1079291-1079050) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
36-191, gnl|bosTau2|chr17 (23102545-23102390) |
|
36-191, gnl|canFam2|chr26 (3437819-3437577) |
|
36-191, gnl|danRer3|chrNA (72863761-72863521) |
|
36-191, gnl|dasNov1|scaffold_35663 (1900-1696) |
|
36-191, gnl|echTel1|scaffold_247431 (331-81) |
|
36-191, gnl|fr1|chrUn (1643337-1643551) |
|
36-191, gnl|galGal2|chr15 (9925610-9925892) |
|
36-191, gnl|hg17|chr12 (131866407-131866652) |
|
36-191, gnl|Hg17|chr12 (131866588-131866433) |
|
36-191, gnl|loxAfr1|scaffold_89506 (4773-4519) |
|
36-191, gnl|mm7|chr5 (109457664-109457434) |
|
36-191, gnl|Mm7|chr5 (109457481-109457636) |
|
36-191, gnl|monDom2|scaffold_54 (1315649-1315881) |
|
36-191, gnl|oryCun1|scaffold_208047 (79657-79889) |
|
36-191, gnl|panTro1|chr10 (134723484-134723729) |
|
36-191, gnl|rheMac2|chr11 (133976395-133976640) |
|
36-191, gnl|rn3|chr12 (46401825-46402055) |
|
36-191, gnl|tetNig1|chr12 (6238105-6238308) |
|
36-191, gnl|xenTro1|scaffold_207 (1079291-1079050) |
