Non-Coding RNA Search

Pig4-TMW8015N16

Sequence:


               
               CAGGGTACCCCCAGCAACAGGGAGGATACGGCAGCAAGGAAGCCTTCGACACCGAAGCCC
AAGCGGGTACAGAAGGCAAGCGACAGGTTGGTGAGCTCCCGAAAGAAGCTGCGGAAGGAG
GACGGGGTCAGGGCCAGNGAGGCCCCGCTCACCCCGCTGAAACAGGTGACCCCCCGGGCG
CCAGTCCCNTGGTCCCATCCCCCGCTAGGGGGCAGCCTGGCCCCCAGCTGTGCAGTGGCA
GAGATATACACGCCGCCGCTCTCCAACCTTGTCGTCTTGCCCCTCCTAGGAGCTGTCCCT
GCTGCCCCTCACGGAGCCTACCATCACCGCCAATTTTAGTCTCTTTGCTCCCTTTGGCAG
CAGCTGCCCCAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGGGTACCCCCAGCAACAGGGAGGATACGGCAGCAAGGAAGCCTTCGACACCGAAGCCC
AAGCGGGTACAGAAGGCAAGCGACAGGTTGGTGAGCTCCCGAAAGAAGCTGCGGAAGGAG
GACGGGGTCAGGGCCAGNGAGGCCCCGCTCACCCCGCTGAAACAGGTGACCCCCCGGGCG
CCAGTCCCNTGGTCCCATCCCCCGCTAGGGGGCAGCCTGGCCCCCAGCTGTGCAGTGGCA
GAGATATACACGCCGCCGCTCTCCAACCTTGTCGTCTTGCCCCTCCTAGGAGCTGTCCCT
GCTGCCCCTCACGGAGCCTACCATCACCGCCAATTTTAGTCTCTTTGCTCCCTTTGGCAG
CAGCTGCCCCAAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               102-369, - strand, RNAz p=0.97555

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               102-369, - strand, RNAz p=0.97555

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               23-369, gnl|bosTau2|chr5 (22427416-22427762)
               

               
               23-369, gnl|Hg17|chr12 (47711085-47710739)
               

               
               23-369, gnl|Mm7|chr15 (98828752-98828405)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               23-369, gnl|bosTau2|chr5 (22427416-22427762)
               

               
               23-369, gnl|Hg17|chr12 (47711085-47710739)
               

               
               23-369, gnl|Mm7|chr15 (98828752-98828405)

	23-369, gnl\|bosTau2\|chr5 (22427416-22427762)
	23-369, gnl\|Hg17\|chr12 (47711085-47710739)
	23-369, gnl\|Mm7\|chr15 (98828752-98828405)