Pig4-TMW8018C02
               |  | CAGAATTTTCCAGAGAAACAGAGCCAATAGGATATATGTGTGTGTGTGTGTACACATACA
TATATAAACACATATATACATACACTTACACACAAATATGCACACACACACATATGTGCG
GAGACTGGGGGAGAGATTGATTTAAGGAATGGGCTCATGCGATTCTAGACATTGGCAAGT
CCAAAGTCTGCAGGATAGGCCAGCAGGCTGAGAAGAgttgcggctggagtctaaaggcag
tcgctggtaaaattccctcttcctgggacacgtcaaacttttggtctatgaagtccttca
actgattggatgaggcccacccatattatggacggtaatctgcttttctcaaaatcttct
gatttaaatgttcatctcccctaaa | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | CAGAATTTTCCAGAGAAACAGAGCCAATAGGATATATGTGTGTGTGTGTGTACACATACA
TATATAAACACATATATACATACACTTACACACAAATATGCACACACACACATATGTGCG
GAGACTGGGGGAGAGATTGATTTAAGGAATGGGCTCATGCGATTCTAGACATTGGCAAGT
CCAAAGTCTGCAGGATAGGCCAGCAGGCTGAGAAGAgttgcggctggagtctaaaggcag
tcgctggtaaaattccctcttcctgggacacgtcaaacttttggtctatgaagtccttca
actgattggatgaggcccacccatattatggacggtaatctgcttttctcaaaatcttct
gatttaaatgttcatctcccctaaa |