Non-Coding RNA Search

Pig4-TMW8019H13

Sequence:


               
               GCGGCTCGAGAATTGTTGCGAGAGTTACTATTTTTTTCCCCCCCCGAGAGATCATGTTTT
TAAAAAGTATCTTTTGCAGAGTTTGAAGTTGTTCTGTCTGAACTCTGCCGTGACCCCATG
ATGTGACCCTGAGAGGATGGACTTGCCCCTCCAGGTGGCCTGCCTTGGGCCCCCTGGGGA
GAGGCACCCTTCCTCTGTGCCCCAGGGGGTGTCGCTGTCGAACTTGAAGGATGAATGAAG
AAAGCCGCGTGGGCACCGACCTGACAAGGCTGTGGGCACTGTGGGGCGGCGCCCGCACGG
GGACCCGCACTCGCTGATCTGAGCTCAGTGTTGTTTTAAGTTAATGTTTAACGGTGTCCC
TTTCCCTCAGAAAGGTTTAACGCTTGCTTGGAATGTGATCTTGCTCCCACTCTAAGGAAT
TTTTATCACCAAAATGAATGTTAATGAATTCTAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGCTCGAGAATTGTTGCGAGAGTTACTATTTTTTTCCCCCCCCGAGAGATCATGTTTT
TAAAAAGTATCTTTTGCAGAGTTTGAAGTTGTTCTGTCTGAACTCTGCCGTGACCCCATG
ATGTGACCCTGAGAGGATGGACTTGCCCCTCCAGGTGGCCTGCCTTGGGCCCCCTGGGGA
GAGGCACCCTTCCTCTGTGCCCCAGGGGGTGTCGCTGTCGAACTTGAAGGATGAATGAAG
AAAGCCGCGTGGGCACCGACCTGACAAGGCTGTGGGCACTGTGGGGCGGCGCCCGCACGG
GGACCCGCACTCGCTGATCTGAGCTCAGTGTTGTTTTAAGTTAATGTTTAACGGTGTCCC
TTTCCCTCAGAAAGGTTTAACGCTTGCTTGGAATGTGATCTTGCTCCCACTCTAAGGAAT
TTTTATCACCAAAATGAATGTTAATGAATTCTAAAAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               44-221, + strand, RNAz p=0.775777

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               44-221, + strand, RNAz p=0.775777

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               3' of AF216962, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               3' of AF216962, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               44-455, gnl|bosTau2|chr26 (17499478-17499888)
               

               
               44-455, gnl|Hg17|chr10 (104827277-104827692)
               

               
               44-455, gnl|Mm7|chr19 (46778858-46779279)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               44-455, gnl|bosTau2|chr26 (17499478-17499888)
               

               
               44-455, gnl|Hg17|chr10 (104827277-104827692)
               

               
               44-455, gnl|Mm7|chr19 (46778858-46779279)

	44-455, gnl\|bosTau2\|chr26 (17499478-17499888)
	44-455, gnl\|Hg17\|chr10 (104827277-104827692)
	44-455, gnl\|Mm7\|chr19 (46778858-46779279)