Pig4-TMW8019O18
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTTGTGTTTTAATGAAGAATGGAGAAGTTTGGACATTTGGTGTAAATAATAAAGGGCAGT GTGGACGAGACACTGGTGCCATGAACCAAGGTGGGAAAGGGTTTGGAGTTGAAAATATGG CAACAGCAATGGACGAGGACCTGGAAGAAGAGCTAGATGAGAAGGATGAGAAGTCCATGA TGTGCCCTCCAGGCATGCATAAGTGGAAGCTGGAGCAGTGCATGGTCTGCACTGTCTGCG GAGACTGTACCGGTTACGGGGCCAGCTGTGTCAGTAGTGGGCGTCCAGACAGAGTTCCTG GAGGGATCTGTGGTTGTGGTTCTGGAGAATCCGGCTGTGCTGTCTGTGGATGTTGTAAGG CTTGTGCAAGAGAATTGGATGGTCAAGAGGCAAGACAAAGAGGAATTCTCGATGCAGTGA AAGAGATGATACCTTTAGATCTTCTGTTAGCTGTCCCAGTACCCGGGGTTAACATTGAAG AACACCTTCAGTTACGACAAGAAGAAAAACGGCAGCGTGTAATCAGGAGACACAGATTAG ATGAAGGCAGAGATGGAAGTGGAGAACGTGGAGAAAAAGATGCAAGCAAAATCACAACAT ATCCTCCAGGCTCCGTGAGGTTTGACTGTGAGCTCCGGGCAGTACAAGTCAGCTGTGGAT TTCACCATTCAGTGGTTTTAATGGAAAATGGTGATGTCTACACATTTGGATATGGGCAGC ATGGGCAGCTTGGACACGGAGATGTCAATTCCAGGGGCTGTCCCACTCTTGTTCAAGCTT TGCCAGGCCCTAGCACACAAGTTACTGCAGGCAGCAACCACACGGCAGTACTTTTAATGG ATGGACAGGTCTTCACATTTGGAAGTTTTTCTAAAGGACAACTGGGTAGACCAATTTTGG ATGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTTGTGTTTTAATGAAGAATGGAGAAGTTTGGACATTTGGTGTAAATAATAAAGGGCAGT GTGGACGAGACACTGGTGCCATGAACCAAGGTGGGAAAGGGTTTGGAGTTGAAAATATGG CAACAGCAATGGACGAGGACCTGGAAGAAGAGCTAGATGAGAAGGATGAGAAGTCCATGA TGTGCCCTCCAGGCATGCATAAGTGGAAGCTGGAGCAGTGCATGGTCTGCACTGTCTGCG GAGACTGTACCGGTTACGGGGCCAGCTGTGTCAGTAGTGGGCGTCCAGACAGAGTTCCTG GAGGGATCTGTGGTTGTGGTTCTGGAGAATCCGGCTGTGCTGTCTGTGGATGTTGTAAGG CTTGTGCAAGAGAATTGGATGGTCAAGAGGCAAGACAAAGAGGAATTCTCGATGCAGTGA AAGAGATGATACCTTTAGATCTTCTGTTAGCTGTCCCAGTACCCGGGGTTAACATTGAAG AACACCTTCAGTTACGACAAGAAGAAAAACGGCAGCGTGTAATCAGGAGACACAGATTAG ATGAAGGCAGAGATGGAAGTGGAGAACGTGGAGAAAAAGATGCAAGCAAAATCACAACAT ATCCTCCAGGCTCCGTGAGGTTTGACTGTGAGCTCCGGGCAGTACAAGTCAGCTGTGGAT TTCACCATTCAGTGGTTTTAATGGAAAATGGTGATGTCTACACATTTGGATATGGGCAGC ATGGGCAGCTTGGACACGGAGATGTCAATTCCAGGGGCTGTCCCACTCTTGTTCAAGCTT TGCCAGGCCCTAGCACACAAGTTACTGCAGGCAGCAACCACACGGCAGTACTTTTAATGG ATGGACAGGTCTTCACATTTGGAAGTTTTTCTAAAGGACAACTGGGTAGACCAATTTTGG ATGT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 98-328, - strand, RNAz p=0.9906 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 98-328, - strand, RNAz p=0.9906 |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 98-328, gnl|bosTau2|chr12 (25986620-25986851) | |
| 98-328, gnl|Hg17|chr13 (76723493-76723264) | |
| 98-328, gnl|Mm7|chr14 (97715195-97714983) | |
| 551-672, gnl|bosTau2|chr12 (26006028-26006149) | |
| 551-672, gnl|canFam2|chr22 (33729907-33730025) | |
| 551-672, gnl|danRer3|chr7 (47524032-47524125) | |
| 551-672, gnl|dasNov1|scaffold_83307 (1285-1403) | |
| 551-672, gnl|echTel1|scaffold_293112 (4160-4278) | |
| 551-672, gnl|fr1|chrUn (155247005-155247100) | |
| 551-672, gnl|galGal2|chr1 (151033233-151033139) | |
| 551-672, gnl|hg17|chr13 (76697545-76697663) | |
| 551-672, gnl|Hg17|chr13 (76697692-76697571) | |
| 551-672, gnl|loxAfr1|scaffold_17738 (23036-22918) | |
| 551-672, gnl|mm7|chr14 (97695067-97695185) | |
| 551-672, gnl|Mm7|chr14 (97695214-97695093) | |
| 551-672, gnl|monDom2|scaffold_8 (14859882-14859996) | |
| 551-672, gnl|oryCun1|scaffold_210957 (6129-6011) | |
| 551-672, gnl|panTro1|chr14 (59295018-59295136) | |
| 551-672, gnl|rheMac2|chr17 (57707725-57707843) | |
| 551-672, gnl|rn3|chr15 (87294144-87294260) | |
| 551-672, gnl|tetNig1|chr2 (8210098-8210193) | |
| 551-672, gnl|xenTro1|scaffold_141 (1789334-1789240) | |
| 753-878, gnl|bosTau2|chr12 (26014969-26015095) | |
| 753-878, gnl|canFam2|chr22 (33720387-33720529) | |
| 753-878, gnl|danRer3|chr7 (47520119-47520255) | |
| 753-878, gnl|echTel1|scaffold_16011 (53-194) | |
| 753-878, gnl|fr1|chrUn (155246467-155246594) | |
| 753-878, gnl|galGal2|chr1 (151040055-151039915) | |
| 753-878, gnl|hg17|chr13 (76689969-76690110) | |
| 753-878, gnl|Hg17|chr13 (76690095-76689969) | |
| 753-878, gnl|mm7|chr14 (97684793-97684934) | |
| 753-878, gnl|Mm7|chr14 (97684919-97684793) | |
| 753-878, gnl|monDom2|scaffold_8 (14855213-14855354) | |
| 753-878, gnl|oryCun1|scaffold_151192 (12502-12643) | |
| 753-878, gnl|rheMac2|chr17 (57698494-57698643) | |
| 753-878, gnl|rn3|chr15 (87284099-87284240) | |
| 753-878, gnl|tetNig1|chr2 (8209647-8209783) | |
| 753-878, gnl|xenTro1|scaffold_141 (1791681-1791537) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 98-328, gnl|bosTau2|chr12 (25986620-25986851) | |
| 98-328, gnl|Hg17|chr13 (76723493-76723264) | |
| 98-328, gnl|Mm7|chr14 (97715195-97714983) | |
| 551-672, gnl|bosTau2|chr12 (26006028-26006149) | |
| 551-672, gnl|canFam2|chr22 (33729907-33730025) | |
| 551-672, gnl|danRer3|chr7 (47524032-47524125) | |
| 551-672, gnl|dasNov1|scaffold_83307 (1285-1403) | |
| 551-672, gnl|echTel1|scaffold_293112 (4160-4278) | |
| 551-672, gnl|fr1|chrUn (155247005-155247100) | |
| 551-672, gnl|galGal2|chr1 (151033233-151033139) | |
| 551-672, gnl|hg17|chr13 (76697545-76697663) | |
| 551-672, gnl|Hg17|chr13 (76697692-76697571) | |
| 551-672, gnl|loxAfr1|scaffold_17738 (23036-22918) | |
| 551-672, gnl|mm7|chr14 (97695067-97695185) | |
| 551-672, gnl|Mm7|chr14 (97695214-97695093) | |
| 551-672, gnl|monDom2|scaffold_8 (14859882-14859996) | |
| 551-672, gnl|oryCun1|scaffold_210957 (6129-6011) | |
| 551-672, gnl|panTro1|chr14 (59295018-59295136) | |
| 551-672, gnl|rheMac2|chr17 (57707725-57707843) | |
| 551-672, gnl|rn3|chr15 (87294144-87294260) | |
| 551-672, gnl|tetNig1|chr2 (8210098-8210193) | |
| 551-672, gnl|xenTro1|scaffold_141 (1789334-1789240) | |
| 753-878, gnl|bosTau2|chr12 (26014969-26015095) | |
| 753-878, gnl|canFam2|chr22 (33720387-33720529) | |
| 753-878, gnl|danRer3|chr7 (47520119-47520255) | |
| 753-878, gnl|echTel1|scaffold_16011 (53-194) | |
| 753-878, gnl|fr1|chrUn (155246467-155246594) | |
| 753-878, gnl|galGal2|chr1 (151040055-151039915) | |
| 753-878, gnl|hg17|chr13 (76689969-76690110) | |
| 753-878, gnl|Hg17|chr13 (76690095-76689969) | |
| 753-878, gnl|mm7|chr14 (97684793-97684934) | |
| 753-878, gnl|Mm7|chr14 (97684919-97684793) | |
| 753-878, gnl|monDom2|scaffold_8 (14855213-14855354) | |
| 753-878, gnl|oryCun1|scaffold_151192 (12502-12643) | |
| 753-878, gnl|rheMac2|chr17 (57698494-57698643) | |
| 753-878, gnl|rn3|chr15 (87284099-87284240) | |
| 753-878, gnl|tetNig1|chr2 (8209647-8209783) | |
| 753-878, gnl|xenTro1|scaffold_141 (1791681-1791537) |