Pig4-TMW8020N14
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GTAAAAAGTCACAAGGAAACATGTCCACCCAGCCTCTGCCCACGAAAAAATCCTGGGATA
AGAGGATTGAAAAGGAACTTACGTGTGTATGTACATTATGGTTGTGTCATGATGGTTGTT
TGAAATGGGTCTTTGTTTGGATGAATCAGGTTTTTCTCAAAGAAGGAACCCTGATGAAGC
TATCTCGGAAAGTCATGCAGCCCCGAATGTTTTTCCTGGTAAGTGGCCACCTGTGTTTCT
GCTGAGTCCAAGGCAGGGAATTGCCTAATAAAGGAGACACTTGCTCAGGACAGATAAGCT
TAGCACATTCAAATAGCAGTTTTAGTTTGACCTTTGGCTGTATTGCTTATTGCTTGTCAA
GCATAGAAAACAAAGTTGTATGATGCATAGCTTTTTTGACGActacaccacagctcacgg
caacgccagatccttaacccactgagtgaggccagggatcgaacccgcaacctcatggtt
cttagtcggatgcgttaacccctgcgccacgacgggaactccAAGTGGGTTTTGATGTAA
GGAAGATGCCCATTCTTCCGCTAACCAAGTCGCAAAACCAGGGCTAGAGTGTCTGCACTC
GATGCTGCAGGCAAATGTGTGTGGTCTGTGAGAAATGTGTTATCAAGAGCCGGGACGCAT
TGTTTTGGCAGAAACCCCACCCAAGAGAGAGCCAGCGCTGATTAAACGAGAGAGCAGCAT
ATGCGACATGATTCGCTCAGTCGAGTCACATTCCACGCACTCCCAGGGCTCCAGAAACAT
CAGATGGCAGTCCTCAAATTAGCTCTCTGCCTCTTCTG
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GTAAAAAGTCACAAGGAAACATGTCCACCCAGCCTCTGCCCACGAAAAAATCCTGGGATA
AGAGGATTGAAAAGGAACTTACGTGTGTATGTACATTATGGTTGTGTCATGATGGTTGTT
TGAAATGGGTCTTTGTTTGGATGAATCAGGTTTTTCTCAAAGAAGGAACCCTGATGAAGC
TATCTCGGAAAGTCATGCAGCCCCGAATGTTTTTCCTGGTAAGTGGCCACCTGTGTTTCT
GCTGAGTCCAAGGCAGGGAATTGCCTAATAAAGGAGACACTTGCTCAGGACAGATAAGCT
TAGCACATTCAAATAGCAGTTTTAGTTTGACCTTTGGCTGTATTGCTTATTGCTTGTCAA
GCATAGAAAACAAAGTTGTATGATGCATAGCTTTTTTGACGActacaccacagctcacgg
caacgccagatccttaacccactgagtgaggccagggatcgaacccgcaacctcatggtt
cttagtcggatgcgttaacccctgcgccacgacgggaactccAAGTGGGTTTTGATGTAA
GGAAGATGCCCATTCTTCCGCTAACCAAGTCGCAAAACCAGGGCTAGAGTGTCTGCACTC
GATGCTGCAGGCAAATGTGTGTGGTCTGTGAGAAATGTGTTATCAAGAGCCGGGACGCAT
TGTTTTGGCAGAAACCCCACCCAAGAGAGAGCCAGCGCTGATTAAACGAGAGAGCAGCAT
ATGCGACATGATTCGCTCAGTCGAGTCACATTCCACGCACTCCCAGGGCTCCAGAAACAT
CAGATGGCAGTCCTCAAATTAGCTCTCTGCCTCTTCTG
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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668-776, - strand, RNAmicro p=0.981298 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
668-776, - strand, RNAmicro p=0.981298 |
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1-392, gnl|bosTau2|chr5 (17449495-17449884) |
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1-392, gnl|Hg17|chr12 (94004011-94003623) |
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1-392, gnl|Mm7|chr10 (93683665-93684029) |
| |
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523-814, gnl|bosTau2|chr5 (17454600-17454888) |
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523-814, gnl|canFam2|chr15 (38079590-38080193) |
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523-814, gnl|echTel1|scaffold_283326 (14917-15474) |
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523-814, gnl|hg17|chr12 (93992986-93993598) |
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523-814, gnl|Hg17|chr12 (93993485-93993196) |
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523-814, gnl|loxAfr1|scaffold_2836 (5123-4514) |
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523-814, gnl|mm7|chr10 (93689016-93688401) |
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523-814, gnl|Mm7|chr10 (93688523-93688808) |
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523-814, gnl|oryCun1|scaffold_186772 (5113-4516) |
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523-814, gnl|panTro1|chr10 (96298196-96298808) |
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523-814, gnl|rheMac2|chr11 (96335105-96335715) |
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523-814, gnl|rn3|chr7 (31295732-31295146) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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1-392, gnl|bosTau2|chr5 (17449495-17449884) |
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1-392, gnl|Hg17|chr12 (94004011-94003623) |
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1-392, gnl|Mm7|chr10 (93683665-93684029) |
| |
|
523-814, gnl|bosTau2|chr5 (17454600-17454888) |
|
523-814, gnl|canFam2|chr15 (38079590-38080193) |
|
523-814, gnl|echTel1|scaffold_283326 (14917-15474) |
|
523-814, gnl|hg17|chr12 (93992986-93993598) |
|
523-814, gnl|Hg17|chr12 (93993485-93993196) |
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523-814, gnl|loxAfr1|scaffold_2836 (5123-4514) |
|
523-814, gnl|mm7|chr10 (93689016-93688401) |
|
523-814, gnl|Mm7|chr10 (93688523-93688808) |
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523-814, gnl|oryCun1|scaffold_186772 (5113-4516) |
|
523-814, gnl|panTro1|chr10 (96298196-96298808) |
|
523-814, gnl|rheMac2|chr11 (96335105-96335715) |
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523-814, gnl|rn3|chr7 (31295732-31295146) |
