Pig4-TMW8025H07
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TTCATTTATTTGTTTATCCCCGCTGTCTCTTGAGAAATAAAAGTTTATTTCGTGTTACAG
ACCTCTTAGATGTGAATCTGTAGGGTTGATTTTAGTGTCGTCATTCTTCAGCTATTACAT
CGTGTTTGTTTGGAGCAGAAGAGGGAGCCTAGTGAGGAAGCGCTTGTTATACTCTGGCCG
GAAGCTGTGGGGCGCTCAGTCCTGAGCCCAGCGGTCAAATTGTCAAAGGAGTTGGGAAAA
CGACCCATCTTAAGTCTTTTATTTAAAGTTACTAAAAATAAGCAAACAGAGATGATCGGT
TCTATTTGGGGAGCTGTCGCGCCGCGTGTGTTTCAAGTTGTTTTCCGGTGACCTGTACGC
TCCATAGATTTTAGTAATACTGGGTATTGTGTATCTTCTGTAATGAATGAACGTGAAGAA
CTCAAAATCCTGAGACGCTTATCTGTCAATTACTTGGCTCAAGGGTAGAGAAACGTAGGA
CGTGAACAAGTTGGTGTTTTGTTTTTGTGTGTGTGTGCGATTGTTTAAATGACCAAAGAA
TAGTCTTGCCTTTTGTTCTTGTCCTATGCTAGGACAAGAGGCTTGAGTTTAATGAAATTA
GACTAGTAATTTTACCTCAGTTATTATGAAAGTGAAAAAAGACCCCCCTTTGTGGATGGT
ATCATCAGTACAGAGCAGGAGAACGATACTACAAATCTGGGTGTGAACAGATGTATTAAA
AAATTTAAAAGCATTTGGTTTGGGGTAGTATTATAGAGAAAATATAGTGAGATTAGCACT
ATGGGATATCTTTAAATATTGAGTTTAGAGTTTGTCCAGTGCTTGTTGATGAGATTGGAT
TAAACAGCTAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTCATTTATTTGTTTATCCCCGCTGTCTCTTGAGAAATAAAAGTTTATTTCGTGTTACAG
ACCTCTTAGATGTGAATCTGTAGGGTTGATTTTAGTGTCGTCATTCTTCAGCTATTACAT
CGTGTTTGTTTGGAGCAGAAGAGGGAGCCTAGTGAGGAAGCGCTTGTTATACTCTGGCCG
GAAGCTGTGGGGCGCTCAGTCCTGAGCCCAGCGGTCAAATTGTCAAAGGAGTTGGGAAAA
CGACCCATCTTAAGTCTTTTATTTAAAGTTACTAAAAATAAGCAAACAGAGATGATCGGT
TCTATTTGGGGAGCTGTCGCGCCGCGTGTGTTTCAAGTTGTTTTCCGGTGACCTGTACGC
TCCATAGATTTTAGTAATACTGGGTATTGTGTATCTTCTGTAATGAATGAACGTGAAGAA
CTCAAAATCCTGAGACGCTTATCTGTCAATTACTTGGCTCAAGGGTAGAGAAACGTAGGA
CGTGAACAAGTTGGTGTTTTGTTTTTGTGTGTGTGTGCGATTGTTTAAATGACCAAAGAA
TAGTCTTGCCTTTTGTTCTTGTCCTATGCTAGGACAAGAGGCTTGAGTTTAATGAAATTA
GACTAGTAATTTTACCTCAGTTATTATGAAAGTGAAAAAAGACCCCCCTTTGTGGATGGT
ATCATCAGTACAGAGCAGGAGAACGATACTACAAATCTGGGTGTGAACAGATGTATTAAA
AAATTTAAAAGCATTTGGTTTGGGGTAGTATTATAGAGAAAATATAGTGAGATTAGCACT
ATGGGATATCTTTAAATATTGAGTTTAGAGTTTGTCCAGTGCTTGTTGATGAGATTGGAT
TAAACAGCTAAAAA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-741, gnl|bosTau2|chr2 (6730480-6731243) |
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1-741, gnl|Hg17|chr5 (109054616-109055387) |
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1-741, gnl|Mm7|chr17 (62810897-62811603) |
| |
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753-854, gnl|bosTau2|chr2 (6732870-6732971) |
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753-854, gnl|canFam2|chr3 (5385832-5385662) |
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753-854, gnl|echTel1|scaffold_103620 (4383-4143) |
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753-854, gnl|hg17|chr5 (109055396-109055533) |
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753-854, gnl|Hg17|chr5 (109055403-109055499) |
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753-854, gnl|loxAfr1|scaffold_93754 (6312-6532) |
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753-854, gnl|mm7|chr17 (62811611-62811749) |
|
753-854, gnl|oryCun1|scaffold_213015 (525-657) |
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753-854, gnl|panTro1|chr4 (115131510-115131647) |
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753-854, gnl|rheMac2|chr6 (106003138-106003275) |
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753-854, gnl|rn3|chr9 (103514465-103514622) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-741, gnl|bosTau2|chr2 (6730480-6731243) |
|
1-741, gnl|Hg17|chr5 (109054616-109055387) |
|
1-741, gnl|Mm7|chr17 (62810897-62811603) |
| |
|
753-854, gnl|bosTau2|chr2 (6732870-6732971) |
|
753-854, gnl|canFam2|chr3 (5385832-5385662) |
|
753-854, gnl|echTel1|scaffold_103620 (4383-4143) |
|
753-854, gnl|hg17|chr5 (109055396-109055533) |
|
753-854, gnl|Hg17|chr5 (109055403-109055499) |
|
753-854, gnl|loxAfr1|scaffold_93754 (6312-6532) |
|
753-854, gnl|mm7|chr17 (62811611-62811749) |
|
753-854, gnl|oryCun1|scaffold_213015 (525-657) |
|
753-854, gnl|panTro1|chr4 (115131510-115131647) |
|
753-854, gnl|rheMac2|chr6 (106003138-106003275) |
|
753-854, gnl|rn3|chr9 (103514465-103514622) |
