Non-Coding RNA Search

Pig4-TMW8031H13

Sequence:


               
               AAGTGTTCTGATTGCCTCCTGTGTGCTGCCACATTGTCCTCCCGGCAAATGTGGGCTTCC
TGGGCAAGGGGGTGACCTATGAGGGGACAGGTGTCAGAGTTGCGAGGGCTGTGCCCATTG
CCCTCTGGGAACTGTGGGTCTTTGCATCTGGGAGTGGGTCAGGTGGCAGGAAGCAGCACT
GGGGAGCCCAGTGGTGACATTCCTAGGTCTGAGGCCCTGGGAGGAGAGGCCCATGACCTG
TTCATTGCTTTCTTTGGACAGAAGGCAGGGGCTCCTCCTGTTGGCTTTGGCCTCAGGGTG
CCTACTGTGTCTTCAGCTTTGAGAGAGACCTTGAGTGTTGCTCTTCTTTCCACCTTCCAA
AGTCCTCTCTTTCTTGAATCTAGGTTCGTTTGGTTATGGGGGGACTCCGAGATCACCCCT
CTGCCCACCGTCAACCTGCCCCAAGCCTCAGGGCCATGATGGCCTGGGGGTGTTGCTCAC
AGGATGGCTGCAAGGACCACAGCCTGTGACACTGCTTCTTGATCCTTTGTGGCACACCCT
TCCTGTAGAGCATTGTGCACAGGTGTCACAGAAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGTGTTCTGATTGCCTCCTGTGTGCTGCCACATTGTCCTCCCGGCAAATGTGGGCTTCC
TGGGCAAGGGGGTGACCTATGAGGGGACAGGTGTCAGAGTTGCGAGGGCTGTGCCCATTG
CCCTCTGGGAACTGTGGGTCTTTGCATCTGGGAGTGGGTCAGGTGGCAGGAAGCAGCACT
GGGGAGCCCAGTGGTGACATTCCTAGGTCTGAGGCCCTGGGAGGAGAGGCCCATGACCTG
TTCATTGCTTTCTTTGGACAGAAGGCAGGGGCTCCTCCTGTTGGCTTTGGCCTCAGGGTG
CCTACTGTGTCTTCAGCTTTGAGAGAGACCTTGAGTGTTGCTCTTCTTTCCACCTTCCAA
AGTCCTCTCTTTCTTGAATCTAGGTTCGTTTGGTTATGGGGGGACTCCGAGATCACCCCT
CTGCCCACCGTCAACCTGCCCCAAGCCTCAGGGCCATGATGGCCTGGGGGTGTTGCTCAC
AGGATGGCTGCAAGGACCACAGCCTGTGACACTGCTTCTTGATCCTTTGTGGCACACCCT
TCCTGTAGAGCATTGTGCACAGGTGTCACAGAAGT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               113-231, + strand, RNAz p=0.683537

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               113-231, + strand, RNAz p=0.683537

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               143-240, + strand, RNAmicro p=0.999832

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               143-240, + strand, RNAmicro p=0.999832

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-574, gnl|bosTau2|chr11 (33835819-33836371)
               

               
               1-574, gnl|Hg17|chr2 (86215864-86215269)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-574, gnl|bosTau2|chr11 (33835819-33836371)
               

               
               1-574, gnl|Hg17|chr2 (86215864-86215269)

	1-574, gnl\|bosTau2\|chr11 (33835819-33836371)
	1-574, gnl\|Hg17\|chr2 (86215864-86215269)