Pig4-TMW8038B18
|
GAAAGATAAAGCAAGTTTACTTTCACAGTCTGAGGCCATCACATATTCTTTATTCCAAGA
AAAGAAAATGTGTTTGAAGAGTATAGCTGAGGAAAGGATTCTGCCTCTCACAGCCGTTGG
CATGCACTTGTCCCAAGCGGTGAAAGCTGGCTACCCACTCGACATGGATCGAGCAGGCCT
GACTCCAGAGGTTCAGAAGATCATTGCTGATGTTATCCGAAACCCTCCTATCAACTCAGA
TATAAATAAAATCAAACTAATCAGAAAGTATGTTCCAAAAACGCATCACACACCCCTTAT
CCACATGGCAATTGAGATCCTGGAAAAAGATTGTGACAATAGAATACAATGCCAGTCTGC
ATGTGATTCCAGCAAAAAGAGATATTTCTCCAACTCTGAAGAGAGCTGTTCAGATGCTAA
GAGAAGCAAGGAAGAAGTTGATAGAAAATATCCTTCTGATTTTTCACTGGAAGATGAGAG
CCACAGGAATTCACTGAAACTAACTTCTTGGAATCAGCCATTTAGCGATCCAGAAATAGA
AGACTTATTTACAGATTCTCATTCACAGACTTCATCCAAAACCTCAGAGAGAAAATTACC
TGGGTGGTTTGCCAAAGAAAATGAGATCTTACCTGATACCAGCAAGAAATCAGCGGCCAA
AACAAAGAAGAAGGGTCTTTTTTGTTAAACTGGCAACTGTTAAAGGAATTCTGTGTGTCT
TGCTCTATCTTAAGAGGGAAGTAGTATTTCATTTCTGAAAAGAGTGGGGAGTAATATTTT
TGTTTACAAATTATTCTAATCTCAAAGTAAAACTCACCTATTTATCGAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GAAAGATAAAGCAAGTTTACTTTCACAGTCTGAGGCCATCACATATTCTTTATTCCAAGA
AAAGAAAATGTGTTTGAAGAGTATAGCTGAGGAAAGGATTCTGCCTCTCACAGCCGTTGG
CATGCACTTGTCCCAAGCGGTGAAAGCTGGCTACCCACTCGACATGGATCGAGCAGGCCT
GACTCCAGAGGTTCAGAAGATCATTGCTGATGTTATCCGAAACCCTCCTATCAACTCAGA
TATAAATAAAATCAAACTAATCAGAAAGTATGTTCCAAAAACGCATCACACACCCCTTAT
CCACATGGCAATTGAGATCCTGGAAAAAGATTGTGACAATAGAATACAATGCCAGTCTGC
ATGTGATTCCAGCAAAAAGAGATATTTCTCCAACTCTGAAGAGAGCTGTTCAGATGCTAA
GAGAAGCAAGGAAGAAGTTGATAGAAAATATCCTTCTGATTTTTCACTGGAAGATGAGAG
CCACAGGAATTCACTGAAACTAACTTCTTGGAATCAGCCATTTAGCGATCCAGAAATAGA
AGACTTATTTACAGATTCTCATTCACAGACTTCATCCAAAACCTCAGAGAGAAAATTACC
TGGGTGGTTTGCCAAAGAAAATGAGATCTTACCTGATACCAGCAAGAAATCAGCGGCCAA
AACAAAGAAGAAGGGTCTTTTTTGTTAAACTGGCAACTGTTAAAGGAATTCTGTGTGTCT
TGCTCTATCTTAAGAGGGAAGTAGTATTTCATTTCTGAAAAGAGTGGGGAGTAATATTTT
TGTTTACAAATTATTCTAATCTCAAAGTAAAACTCACCTATTTATCGAAAAA
|
|
gi|61834313|ref|XP_581288.1| |
Protein identifier
|
gi|61834313|ref|XP_581288.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
|
76-245, gnl|bosTau2|chr27 (13967159-13966989) |
|
76-245, gnl|Hg17|chr8 (31134425-31134595) |
|
76-245, gnl|Mm7|chr8 (32016954-32016784) |
| |
|
567-829, gnl|bosTau2|chr27 (13960949-13960694) |
|
567-829, gnl|canFam2|chr16 (36120591-36119773) |
|
567-829, gnl|dasNov1|scaffold_15641 (40166-40940) |
|
567-829, gnl|echTel1|scaffold_300176 (88811-89460) |
|
567-829, gnl|hg17|chr8 (31150004-31150815) |
|
567-829, gnl|Hg17|chr8 (31150051-31150291) |
|
567-829, gnl|mm7|chr8 (32004374-32003667) |
|
567-829, gnl|Mm7|chr8 (32004331-32004089) |
|
567-829, gnl|oryCun1|scaffold_137525 (10563-11450) |
|
567-829, gnl|panTro1|chr7_random (21418479-21419290) |
|
567-829, gnl|rheMac2|chr8 (31432998-31433806) |
|
567-829, gnl|rn3|chr16 (62667904-62668668) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
76-245, gnl|bosTau2|chr27 (13967159-13966989) |
|
76-245, gnl|Hg17|chr8 (31134425-31134595) |
|
76-245, gnl|Mm7|chr8 (32016954-32016784) |
| |
|
567-829, gnl|bosTau2|chr27 (13960949-13960694) |
|
567-829, gnl|canFam2|chr16 (36120591-36119773) |
|
567-829, gnl|dasNov1|scaffold_15641 (40166-40940) |
|
567-829, gnl|echTel1|scaffold_300176 (88811-89460) |
|
567-829, gnl|hg17|chr8 (31150004-31150815) |
|
567-829, gnl|Hg17|chr8 (31150051-31150291) |
|
567-829, gnl|mm7|chr8 (32004374-32003667) |
|
567-829, gnl|Mm7|chr8 (32004331-32004089) |
|
567-829, gnl|oryCun1|scaffold_137525 (10563-11450) |
|
567-829, gnl|panTro1|chr7_random (21418479-21419290) |
|
567-829, gnl|rheMac2|chr8 (31432998-31433806) |
|
567-829, gnl|rn3|chr16 (62667904-62668668) |
