Non-Coding RNA Search

Pig4-TMW8042H02

Sequence:


               
               GCGGCTCGAGGGATGACAGGAGGGGAGGGGTGCGGAGTGGCAAGAACCCAGGACCTGAAT
TCCCAGCCTGGCCAGCCCTGCAGCCATGATTGCCCTCAAGAGAAACAGAGGCTCCTTGAG
GTCAGCAGGGTGGCGGGGAGTTGGGCGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGCTCGAGGGATGACAGGAGGGGAGGGGTGCGGAGTGGCAAGAACCCAGGACCTGAAT
TCCCAGCCTGGCCAGCCCTGCAGCCATGATTGCCCTCAAGAGAAACAGAGGCTCCTTGAG
GTCAGCAGGGTGGCGGGGAGTTGGGCGT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               10-144, - strand, RNAz p=0.983774

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               10-144, - strand, RNAz p=0.983774

Aligned organism(s): 14 entry(ies)

More info

Aligned organism(s): 14 entry(ies)

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               10-144, gnl|bosTau2|chr23 (18078647-18078514)
               

               
               10-144, gnl|canFam2|chr12 (15220020-15220306)
               

               
               10-144, gnl|dasNov1|scaffold_8801 (35871-35563)
               

               
               10-144, gnl|echTel1|scaffold_133406 (155-481)
               

               
               10-144, gnl|hg17|chr6 (43853821-43854131)
               

               
               10-144, gnl|Hg17|chr6 (43853868-43854004)
               

               
               10-144, gnl|loxAfr1|scaffold_6958 (3755-4063)
               

               
               10-144, gnl|mm7|chr17 (44154272-44153970)
               

               
               10-144, gnl|Mm7|chr17 (44154222-44154091)
               

               
               10-144, gnl|monDom2|scaffold_0 (197635020-197634727)
               

               
               10-144, gnl|oryCun1|scaffold_209794 (54099-53856)
               

               
               10-144, gnl|panTro1|chr5 (44456618-44456933)
               

               
               10-144, gnl|rheMac2|chr4 (43690354-43690664)
               

               
               10-144, gnl|rn3|chr9 (10525521-10525816)

Aligned organism(s): 14 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-144, gnl|bosTau2|chr23 (18078647-18078514)
               

               
               10-144, gnl|canFam2|chr12 (15220020-15220306)
               

               
               10-144, gnl|dasNov1|scaffold_8801 (35871-35563)
               

               
               10-144, gnl|echTel1|scaffold_133406 (155-481)
               

               
               10-144, gnl|hg17|chr6 (43853821-43854131)
               

               
               10-144, gnl|Hg17|chr6 (43853868-43854004)
               

               
               10-144, gnl|loxAfr1|scaffold_6958 (3755-4063)
               

               
               10-144, gnl|mm7|chr17 (44154272-44153970)
               

               
               10-144, gnl|Mm7|chr17 (44154222-44154091)
               

               
               10-144, gnl|monDom2|scaffold_0 (197635020-197634727)
               

               
               10-144, gnl|oryCun1|scaffold_209794 (54099-53856)
               

               
               10-144, gnl|panTro1|chr5 (44456618-44456933)
               

               
               10-144, gnl|rheMac2|chr4 (43690354-43690664)
               

               
               10-144, gnl|rn3|chr9 (10525521-10525816)

	10-144, gnl\|bosTau2\|chr23 (18078647-18078514)
	10-144, gnl\|canFam2\|chr12 (15220020-15220306)
	10-144, gnl\|dasNov1\|scaffold_8801 (35871-35563)
	10-144, gnl\|echTel1\|scaffold_133406 (155-481)
	10-144, gnl\|hg17\|chr6 (43853821-43854131)
	10-144, gnl\|Hg17\|chr6 (43853868-43854004)
	10-144, gnl\|loxAfr1\|scaffold_6958 (3755-4063)
	10-144, gnl\|mm7\|chr17 (44154272-44153970)
	10-144, gnl\|Mm7\|chr17 (44154222-44154091)
	10-144, gnl\|monDom2\|scaffold_0 (197635020-197634727)
	10-144, gnl\|oryCun1\|scaffold_209794 (54099-53856)
	10-144, gnl\|panTro1\|chr5 (44456618-44456933)
	10-144, gnl\|rheMac2\|chr4 (43690354-43690664)
	10-144, gnl\|rn3\|chr9 (10525521-10525816)