Non-Coding RNA Search

Pig4-TMW8042K09

Sequence:


               
               CACAGAGGGGATTCGATTTCTCCACATCCCTGCTTTAGTCTTTTTCCTAGTTTGATTTCG
TTGTTGAAATCATCTGTAAAGAGTGCTACAACTTAAGTTGCCTTCAAGAGGGCAACTTTA
TAAATTTTAACAATTCTGGATTTTCATTAAGTGTATTGACTAATTTGTGTATTTGTTGAA
AACCAGGCGGTTTTGTCCTGGTTTTCCCTACCATTGTTCAGCCTGAACTCTGGAAATTAA
GAAGAGAACCAGTACTTACTGAGTATTGGCCCTGTGGGAGCAAGTTTTACATTTAATTTC
ATCTAAATCCTCACAACAGCTTCAAAAGACAGCCACGTATTTTTCCCCATGACTAGAATT
AAAGAAGCAGAATGTTAGTGGCTAAGAATTCTGCCCAAGGTAACATCATCTAGAATTGGC
AAAGCTGGCCTTCAAAATCAAGTCTTCCAAAAAAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACAGAGGGGATTCGATTTCTCCACATCCCTGCTTTAGTCTTTTTCCTAGTTTGATTTCG
TTGTTGAAATCATCTGTAAAGAGTGCTACAACTTAAGTTGCCTTCAAGAGGGCAACTTTA
TAAATTTTAACAATTCTGGATTTTCATTAAGTGTATTGACTAATTTGTGTATTTGTTGAA
AACCAGGCGGTTTTGTCCTGGTTTTCCCTACCATTGTTCAGCCTGAACTCTGGAAATTAA
GAAGAGAACCAGTACTTACTGAGTATTGGCCCTGTGGGAGCAAGTTTTACATTTAATTTC
ATCTAAATCCTCACAACAGCTTCAAAAGACAGCCACGTATTTTTCCCCATGACTAGAATT
AAAGAAGCAGAATGTTAGTGGCTAAGAATTCTGCCCAAGGTAACATCATCTAGAATTGGC
AAAGCTGGCCTTCAAAATCAAGTCTTCCAAAAAAAT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               160-266, + strand, RNAz p=0.77146

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               160-266, + strand, RNAz p=0.77146

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               3-451, gnl|bosTau2|chr3 (76976233-76975789)
               

               
               3-451, gnl|Hg17|chr1 (36034186-36034655)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-451, gnl|bosTau2|chr3 (76976233-76975789)
               

               
               3-451, gnl|Hg17|chr1 (36034186-36034655)

	3-451, gnl\|bosTau2\|chr3 (76976233-76975789)
	3-451, gnl\|Hg17\|chr1 (36034186-36034655)