Pig4-TMW8045E01
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tttttttttttttttttttttatttttttttccctttttttttttttttttttttAAAGG
TTTCAAAAATAATTTATTTTTTCAACCCTGCCCTATTTTAAGGGGGACCCAGTGCTTTTA
CTTGGCATCAATTATAAGGGGGTTTTGAAACAATTCAATTTTAAACCCAATGGGATAATT
ATTCTTCCCCCCATTCCTTTGGGGGGACCCTGCCAACAGGGGACAGGTTCCATTTTATTC
CAATCTGGGTTGCTGGATATCCCCATACCACACCCCAAAAAGTGGCCCCACTATCTAAAA
TAACATTACCAAATTTGTCATGGAAATCAGGGGCCCCCTTTTGGGGGTTCTGCCTTGCCA
TTGTTTGCTTAATGTTTCAAACCCTGAAACAAATTAAGGCGTTTTTGGCCAAGGGAAACA
TCGGGAAACTTTAAACAAAACTGCTGCAACCGTTAACTTTTTGCAACTACCCCTCCGGGA
CCCTTGCAAAAAACCCTGAAAAAAAAAAAAAAATTCCCCCCCACCGGACTAAGGGATCCC
AACCCGGTCCCAAACTTAAA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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tttttttttttttttttttttatttttttttccctttttttttttttttttttttAAAGG
TTTCAAAAATAATTTATTTTTTCAACCCTGCCCTATTTTAAGGGGGACCCAGTGCTTTTA
CTTGGCATCAATTATAAGGGGGTTTTGAAACAATTCAATTTTAAACCCAATGGGATAATT
ATTCTTCCCCCCATTCCTTTGGGGGGACCCTGCCAACAGGGGACAGGTTCCATTTTATTC
CAATCTGGGTTGCTGGATATCCCCATACCACACCCCAAAAAGTGGCCCCACTATCTAAAA
TAACATTACCAAATTTGTCATGGAAATCAGGGGCCCCCTTTTGGGGGTTCTGCCTTGCCA
TTGTTTGCTTAATGTTTCAAACCCTGAAACAAATTAAGGCGTTTTTGGCCAAGGGAAACA
TCGGGAAACTTTAAACAAAACTGCTGCAACCGTTAACTTTTTGCAACTACCCCTCCGGGA
CCCTTGCAAAAAACCCTGAAAAAAAAAAAAAAATTCCCCCCCACCGGACTAAGGGATCCC
AACCCGGTCCCAAACTTAAA
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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13-451, gnl|bosTau2|chr29 (41534406-41534846) |
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13-451, gnl|Hg17|chr1 (54267984-54267521) |
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13-451, gnl|Mm7|chr1 (151452476-151452894) |
| |
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23-450, gnl|bosTau2|chr17 (33343061-33342634) |
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23-450, gnl|canFam2|chr29 (3323021-3323347) |
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23-450, gnl|dasNov1|scaffold_9125 (103837-104181) |
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23-450, gnl|echTel1|scaffold_204117 (3210-2867) |
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23-450, gnl|hg17|chr1 (159680862-159681203) |
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23-450, gnl|Hg17|chr22 (33914947-33915518) |
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23-450, gnl|loxAfr1|scaffold_60147 (25876-26184) |
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23-450, gnl|Mm7|chr1 (151452480-151452893) |
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23-450, gnl|mm7|chr6 (50930891-50930567) |
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23-450, gnl|monDom2|scaffold_19 (25801626-25801299) |
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23-450, gnl|oryCun1|scaffold_89888 (3586-3929) |
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23-450, gnl|panTro1|chr1 (141878923-141879264) |
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23-450, gnl|rheMac2|chr1 (192899227-192899564) |
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23-450, gnl|rn3|chrX (122144438-122144787) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
13-451, gnl|bosTau2|chr29 (41534406-41534846) |
|
13-451, gnl|Hg17|chr1 (54267984-54267521) |
|
13-451, gnl|Mm7|chr1 (151452476-151452894) |
| |
|
23-450, gnl|bosTau2|chr17 (33343061-33342634) |
|
23-450, gnl|canFam2|chr29 (3323021-3323347) |
|
23-450, gnl|dasNov1|scaffold_9125 (103837-104181) |
|
23-450, gnl|echTel1|scaffold_204117 (3210-2867) |
|
23-450, gnl|hg17|chr1 (159680862-159681203) |
|
23-450, gnl|Hg17|chr22 (33914947-33915518) |
|
23-450, gnl|loxAfr1|scaffold_60147 (25876-26184) |
|
23-450, gnl|Mm7|chr1 (151452480-151452893) |
|
23-450, gnl|mm7|chr6 (50930891-50930567) |
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23-450, gnl|monDom2|scaffold_19 (25801626-25801299) |
|
23-450, gnl|oryCun1|scaffold_89888 (3586-3929) |
|
23-450, gnl|panTro1|chr1 (141878923-141879264) |
|
23-450, gnl|rheMac2|chr1 (192899227-192899564) |
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23-450, gnl|rn3|chrX (122144438-122144787) |
