Pig4-TMW8046D24
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TATTTTGAGCACAGTAAGATGAAAAGCCTTATCCTTGTCCTAGAGCCTTTTATAATAGAG ACCTTAATTAATTTCCTGCTTTGACCAAGAAATTTGATTGGTGACTGTATCTGGATCTCT TCTCCATGAGAAGTTAAATTTATTTGAAATTTCTAAAGCTCTTGGACTCCTTGATGTTTC ATGAGGACATCTTGTTAAAATAGCACTAGTCTAGGAGTCAGACTGGCCATTAAGAGCTGT GTGATCTTGGGCAAATCATTTCCCTCCTGGGTTTCATTACCTTAAAAATGAGAGGGTTAA ATTAGATGATTTCTCATGTTTCTTCTACTCCTAAATTCTATGATTTTAGGGAGAAAATCC CCTTCAACATTCCTGGGATATATATCTAATAGTCCCAGATATTGTGAAACTTCCCTATTG ACGATAAAGAGGGATGGGGAAGGCTACAAGTAAGTATATCTTCCTATTTTCTCTAATTTT TAGAGCTTTTCCCAGCAAAGAAAGGACAGTAATTAACTATTAATTTTTTAACTTCAACAG CGATTTCAAGTCCTCTGTATCTTCAAATACCTCTTTGGTGTGTTACCATTTATCATTATC GTTTACCTTGAAGATTCATTCTCTTCAATGAGTTTCCCTTTTCTCATCACAGAAATAAAA AATTACCCTCCTTAATTTGTTACTGTGATTTAGCAAGTGAATAATTCACACAAAGGTGTG AAGAAATGATAGAGTTGACAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TATTTTGAGCACAGTAAGATGAAAAGCCTTATCCTTGTCCTAGAGCCTTTTATAATAGAG ACCTTAATTAATTTCCTGCTTTGACCAAGAAATTTGATTGGTGACTGTATCTGGATCTCT TCTCCATGAGAAGTTAAATTTATTTGAAATTTCTAAAGCTCTTGGACTCCTTGATGTTTC ATGAGGACATCTTGTTAAAATAGCACTAGTCTAGGAGTCAGACTGGCCATTAAGAGCTGT GTGATCTTGGGCAAATCATTTCCCTCCTGGGTTTCATTACCTTAAAAATGAGAGGGTTAA ATTAGATGATTTCTCATGTTTCTTCTACTCCTAAATTCTATGATTTTAGGGAGAAAATCC CCTTCAACATTCCTGGGATATATATCTAATAGTCCCAGATATTGTGAAACTTCCCTATTG ACGATAAAGAGGGATGGGGAAGGCTACAAGTAAGTATATCTTCCTATTTTCTCTAATTTT TAGAGCTTTTCCCAGCAAAGAAAGGACAGTAATTAACTATTAATTTTTTAACTTCAACAG CGATTTCAAGTCCTCTGTATCTTCAAATACCTCTTTGGTGTGTTACCATTTATCATTATC GTTTACCTTGAAGATTCATTCTCTTCAATGAGTTTCCCTTTTCTCATCACAGAAATAAAA AATTACCCTCCTTAATTTGTTACTGTGATTTAGCAAGTGAATAATTCACACAAAGGTGTG AAGAAATGATAGAGTTGACAA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 298-456, + strand, RNAz p=0.890394 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 298-456, + strand, RNAz p=0.890394 |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 1-131, gnl|bosTau2|chr15 (49543850-49543720) | |
| 1-131, gnl|canFam2|chr18 (44977079-44976857) | |
| 1-131, gnl|dasNov1|scaffold_14974 (42868-43081) | |
| 1-131, gnl|echTel1|scaffold_53604 (161-337) | |
| 1-131, gnl|hg17|chr11 (47704132-47704346) | |
| 1-131, gnl|Hg17|chr11 (47704336-47704209) | |
| 1-131, gnl|loxAfr1|scaffold_794 (110301-110081) | |
| 1-131, gnl|mm7|chr2 (90625315-90625139) | |
| 1-131, gnl|oryCun1|scaffold_194197 (7798-8017) | |
| 1-131, gnl|panTro1|chr9 (48232081-48232295) | |
| 1-131, gnl|rheMac2|chr14 (24380388-24380173) | |
| 1-131, gnl|rn3|chr3 (75031582-75031400) | |
| 197-518, gnl|bosTau2|chr15 (49543596-49543275) | |
| 197-518, gnl|Hg17|chr11 (47704135-47703797) | |
| 197-518, gnl|Mm7|chr2 (90625310-90625637) | |
| 532-740, gnl|bosTau2|chr15 (49543221-49543018) | |
| 532-740, gnl|canFam2|chr18 (44977709-44977449) | |
| 532-740, gnl|dasNov1|scaffold_14974 (42204-42481) | |
| 532-740, gnl|hg17|chr11 (47703496-47703744) | |
| 532-740, gnl|Hg17|chr11 (47703743-47703547) | |
| 532-740, gnl|loxAfr1|scaffold_794 (110955-110696) | |
| 532-740, gnl|mm7|chr2 (90625916-90625680) | |
| 532-740, gnl|Mm7|chr2 (90625687-90625864) | |
| 532-740, gnl|panTro1|chr9 (48231445-48231693) | |
| 532-740, gnl|rheMac2|chr14 (24381027-24380776) | |
| 532-740, gnl|rn3|chr3 (75032205-75031967) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-131, gnl|bosTau2|chr15 (49543850-49543720) | |
| 1-131, gnl|canFam2|chr18 (44977079-44976857) | |
| 1-131, gnl|dasNov1|scaffold_14974 (42868-43081) | |
| 1-131, gnl|echTel1|scaffold_53604 (161-337) | |
| 1-131, gnl|hg17|chr11 (47704132-47704346) | |
| 1-131, gnl|Hg17|chr11 (47704336-47704209) | |
| 1-131, gnl|loxAfr1|scaffold_794 (110301-110081) | |
| 1-131, gnl|mm7|chr2 (90625315-90625139) | |
| 1-131, gnl|oryCun1|scaffold_194197 (7798-8017) | |
| 1-131, gnl|panTro1|chr9 (48232081-48232295) | |
| 1-131, gnl|rheMac2|chr14 (24380388-24380173) | |
| 1-131, gnl|rn3|chr3 (75031582-75031400) | |
| 197-518, gnl|bosTau2|chr15 (49543596-49543275) | |
| 197-518, gnl|Hg17|chr11 (47704135-47703797) | |
| 197-518, gnl|Mm7|chr2 (90625310-90625637) | |
| 532-740, gnl|bosTau2|chr15 (49543221-49543018) | |
| 532-740, gnl|canFam2|chr18 (44977709-44977449) | |
| 532-740, gnl|dasNov1|scaffold_14974 (42204-42481) | |
| 532-740, gnl|hg17|chr11 (47703496-47703744) | |
| 532-740, gnl|Hg17|chr11 (47703743-47703547) | |
| 532-740, gnl|loxAfr1|scaffold_794 (110955-110696) | |
| 532-740, gnl|mm7|chr2 (90625916-90625680) | |
| 532-740, gnl|Mm7|chr2 (90625687-90625864) | |
| 532-740, gnl|panTro1|chr9 (48231445-48231693) | |
| 532-740, gnl|rheMac2|chr14 (24381027-24380776) | |
| 532-740, gnl|rn3|chr3 (75032205-75031967) |