Non-Coding RNA Search

Pig4-TMW8046H08

Sequence:


               
               ACCCCCCAAGGGTAACATCAGTCTTGGCTTTTCACAGCAAGAGATTACTTTTGTTTGGTT
CCATactttatataaatagaatcatacagtacatactcttttgtgtctggtttctctcat
tcaacattgtatttctgagatGTGTTCATATTGTATAGGTGCAGATCATAGGACTCTTCA
TCTGTATAATGTTCATCAGTCAGATTACAGCTGATTCGAGTTATCCATAGGCTTGTTGAA
TAGCCAATGATTACTACCCCACAGGGTGGAGAGCCTTTTTTCTCTCTCCCCTGGGACCCA
GTGTAGGCAGAGAACTCTCAGGTAGAAATTGGTTTGGCCAATCATAAAAGGAGATTAATT
CTATTCAGCTGGGTGAGAGCCTCTCTGCTTTCTAGTCATGGACCAGAGAAGCATTCTTCC
TCCATAACCTAGATTTTCAGTCTCTTTCATTTAGAATGTGTTGCATGTGAAGAATGAGAA
TCTCACTGCTTAGGCTATAGTGATTAGGTAAGAGAACCAAGGAATGTCCCTGGCCGCCCT
GACAGTTATGTGAAGCTTCATGGGGCTTCCTTTGTACTGTTAAAATTTAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCCCCCAAGGGTAACATCAGTCTTGGCTTTTCACAGCAAGAGATTACTTTTGTTTGGTT
CCATactttatataaatagaatcatacagtacatactcttttgtgtctggtttctctcat
tcaacattgtatttctgagatGTGTTCATATTGTATAGGTGCAGATCATAGGACTCTTCA
TCTGTATAATGTTCATCAGTCAGATTACAGCTGATTCGAGTTATCCATAGGCTTGTTGAA
TAGCCAATGATTACTACCCCACAGGGTGGAGAGCCTTTTTTCTCTCTCCCCTGGGACCCA
GTGTAGGCAGAGAACTCTCAGGTAGAAATTGGTTTGGCCAATCATAAAAGGAGATTAATT
CTATTCAGCTGGGTGAGAGCCTCTCTGCTTTCTAGTCATGGACCAGAGAAGCATTCTTCC
TCCATAACCTAGATTTTCAGTCTCTTTCATTTAGAATGTGTTGCATGTGAAGAATGAGAA
TCTCACTGCTTAGGCTATAGTGATTAGGTAAGAGAACCAAGGAATGTCCCTGGCCGCCCT
GACAGTTATGTGAAGCTTCATGGGGCTTCCTTTGTACTGTTAAAATTTAAAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               233-348, - strand, RNAz p=0.856448

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               233-348, - strand, RNAz p=0.856448

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               4-584, gnl|bosTau2|chr16 (1007731-1008308)
               

               
               4-584, gnl|Hg17|chr1 (141511860-141512890)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-584, gnl|bosTau2|chr16 (1007731-1008308)
               

               
               4-584, gnl|Hg17|chr1 (141511860-141512890)

	4-584, gnl\|bosTau2\|chr16 (1007731-1008308)
	4-584, gnl\|Hg17\|chr1 (141511860-141512890)