Pig4-TMW8047B24
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACCAAACATTTAAGTTAACATCTCTACAGAACTTTAGCAACTGTCGGCCCAACTCTTGCA CAACACTAGTATCTAATCATAGTTTATCTCACAGACAGCGTGAGACAGTTCTTACAGAAA CACCCCAGGACACAATTGAATTAAACAGACTGAATTTAGAATCTTCCAATTCAAAGTACT CCTTGAATACAGAGTCCTCAGTATCTTATATTGATTCAGCTGTAATTTCACCAGATACTG TCCCTCTTGGAACAGGAACTTCCATATTATCTAAACAGGTTCAAAATAAACCAAAAACTG GTCGAAGTTTGTTAGGAGGACCAACTGCTCTTAGCCCATTAACCCCAAGTTTTGGGATTT TGCCATTAGAAACCCCAAGTCCTGGAGATGGATCCTATTTACAAAACTACACTAATACAT CTTCTGTAATTGACGTGCCATCCACCGGAGCCCCTTCAAAAAAGTCTGTTACCAGAATCG GCCAAACTGGAACAAAGTCTGTCTTCTCACAAAGTGGAAATAGTCGAGAGGTAACCCCAA TTCTTCTTTGCGCAAACACAAAGTTCTGGCCCACAAACAAGTACAACACCTCAGGTATTG AGCCCCACTATCACATCTCCCCCAAACGCACTGCCTCGAAGAAGTTCACGACTTTTTACT AGTGACAGCTCTACAACCAAGGAGAAAGGCAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACCAAACATTTAAGTTAACATCTCTACAGAACTTTAGCAACTGTCGGCCCAACTCTTGCA CAACACTAGTATCTAATCATAGTTTATCTCACAGACAGCGTGAGACAGTTCTTACAGAAA CACCCCAGGACACAATTGAATTAAACAGACTGAATTTAGAATCTTCCAATTCAAAGTACT CCTTGAATACAGAGTCCTCAGTATCTTATATTGATTCAGCTGTAATTTCACCAGATACTG TCCCTCTTGGAACAGGAACTTCCATATTATCTAAACAGGTTCAAAATAAACCAAAAACTG GTCGAAGTTTGTTAGGAGGACCAACTGCTCTTAGCCCATTAACCCCAAGTTTTGGGATTT TGCCATTAGAAACCCCAAGTCCTGGAGATGGATCCTATTTACAAAACTACACTAATACAT CTTCTGTAATTGACGTGCCATCCACCGGAGCCCCTTCAAAAAAGTCTGTTACCAGAATCG GCCAAACTGGAACAAAGTCTGTCTTCTCACAAAGTGGAAATAGTCGAGAGGTAACCCCAA TTCTTCTTTGCGCAAACACAAAGTTCTGGCCCACAAACAAGTACAACACCTCAGGTATTG AGCCCCACTATCACATCTCCCCCAAACGCACTGCCTCGAAGAAGTTCACGACTTTTTACT AGTGACAGCTCTACAACCAAGGAGAAAGGCAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 138-296, - strand, RNAz p=0.87241 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 138-296, - strand, RNAz p=0.87241 |
| Aligned organism(s): 60 entry(ies) | More info |
| Aligned organism(s): 60 entry(ies) | Help | Less info |
| 138-349, gnl|bosTau2|chr19 (41677126-41677337) | |
| 138-349, gnl|canFam2|chr9 (12392814-12392604) | |
| 138-349, gnl|canFam2|chr9 (12392820-12392623) | |
| 138-349, gnl|danRer3|chr3 (12574006-12574216) | |
| 138-349, gnl|danRer3|chr3 (12574000-12574197) | |
| 138-349, gnl|echTel1|scaffold_319102 (35064-35274) | |
| 138-349, gnl|echTel1|scaffold_319102 (35058-35255) | |
| 138-349, gnl|fr1|chrUn (315554715-315554496) | |
| 138-349, gnl|fr1|chrUn (315554721-315554515) | |
| 138-349, gnl|galGal2|chr27 (1308054-1307841) | |
| 138-349, gnl|galGal2|chr27 (1308060-1307860) | |
| 138-349, gnl|hg17|chr17 (42589273-42589470) | |
| 138-349, gnl|Hg17|chr17 (42589489-42589278) | |
| 138-349, gnl|hg17|chrY (10622429-10622639) | |
| 138-349, gnl|loxAfr1|scaffold_43541 (1333-1544) | |
| 138-349, gnl|loxAfr1|scaffold_43541 (1327-1525) | |
| 138-349, gnl|mm7|chr11 (104637305-104637515) | |
| 138-349, gnl|mm7|chr11 (104637299-104637496) | |
| 138-349, gnl|Mm7|chr11 (104637515-104637304) | |
| 138-349, gnl|monDom2|scaffold_18 (38896886-38896676) | |
| 138-349, gnl|monDom2|scaffold_18 (38896892-38896695) | |
| 138-349, gnl|oryCun1|scaffold_175869 (56529-56319) | |
| 138-349, gnl|oryCun1|scaffold_175869 (56535-56338) | |
| 138-349, gnl|panTro1|chr19 (62530653-62530456) | |
| 138-349, gnl|panTro1|chrY (9670830-9671039) | |
| 138-349, gnl|rheMac2|chr16 (57236780-57236990) | |
| 138-349, gnl|rheMac2|chr16 (57236774-57236971) | |
| 138-349, gnl|rn3|chr10 (93716375-93716585) | |
| 138-349, gnl|rn3|chr10 (93716369-93716566) | |
| 138-349, gnl|tetNig1|chrUn_random (111579785-111580004) | |
| 138-349, gnl|tetNig1|chrUn_random (111579779-111579985) | |
| 138-349, gnl|xenTro1|scaffold_221 (1384587-1384377) | |
| 138-349, gnl|xenTro1|scaffold_221 (1384593-1384396) | |
| 463-581, gnl|bosTau2|chr19 (41680670-41680787) | |
| 463-581, gnl|canFam2|chr9 (12397106-12396991) | |
| 463-581, gnl|canFam2|chr9 (12397127-12396954) | |
| 463-581, gnl|danRer3|chr3 (12570996-12571109) | |
| 463-581, gnl|danRer3|chr3 (12570974-12571114) | |
| 463-581, gnl|echTel1|scaffold_319102 (31017-31130) | |
| 463-581, gnl|echTel1|scaffold_319102 (30994-31173) | |
| 463-581, gnl|fr1|chrUn (281328067-281328174) | |
| 463-581, gnl|fr1|chrUn (281328058-281328190) | |
| 463-581, gnl|galGal2|chr27 (1311467-1311362) | |
| 463-581, gnl|galGal2|chr27 (1311504-1311315) | |
| 463-581, gnl|hg17|chr17 (42584151-42584321) | |
| 463-581, gnl|Hg17|chr17 (42584285-42584171) | |
| 463-581, gnl|hg17|chrY (10622202-10622314) | |
| 463-581, gnl|mm7|chr11 (104635093-104635208) | |
| 463-581, gnl|mm7|chr11 (104635072-104635244) | |
| 463-581, gnl|Mm7|chr11 (104635209-104635092) | |
| 463-581, gnl|monDom2|scaffold_18 (38903711-38903596) | |
| 463-581, gnl|monDom2|scaffold_18 (38903730-38903561) | |
| 463-581, gnl|oryCun1|scaffold_71713 (387-502) | |
| 463-581, gnl|oryCun1|scaffold_71713 (366-541) | |
| 463-581, gnl|panTro1|chr19 (62535772-62535602) | |
| 463-581, gnl|panTro1|chrY (9670602-9670714) | |
| 463-581, gnl|rn3|chr10 (93714090-93714205) | |
| 463-581, gnl|rn3|chr10 (93714070-93714234) | |
| 463-581, gnl|xenTro1|scaffold_221 (1386389-1386275) | |
| 463-581, gnl|xenTro1|scaffold_221 (1386410-1386269) |
| Aligned organism(s): 60 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 138-349, gnl|bosTau2|chr19 (41677126-41677337) | |
| 138-349, gnl|canFam2|chr9 (12392814-12392604) | |
| 138-349, gnl|canFam2|chr9 (12392820-12392623) | |
| 138-349, gnl|danRer3|chr3 (12574006-12574216) | |
| 138-349, gnl|danRer3|chr3 (12574000-12574197) | |
| 138-349, gnl|echTel1|scaffold_319102 (35064-35274) | |
| 138-349, gnl|echTel1|scaffold_319102 (35058-35255) | |
| 138-349, gnl|fr1|chrUn (315554715-315554496) | |
| 138-349, gnl|fr1|chrUn (315554721-315554515) | |
| 138-349, gnl|galGal2|chr27 (1308054-1307841) | |
| 138-349, gnl|galGal2|chr27 (1308060-1307860) | |
| 138-349, gnl|hg17|chr17 (42589273-42589470) | |
| 138-349, gnl|Hg17|chr17 (42589489-42589278) | |
| 138-349, gnl|hg17|chrY (10622429-10622639) | |
| 138-349, gnl|loxAfr1|scaffold_43541 (1333-1544) | |
| 138-349, gnl|loxAfr1|scaffold_43541 (1327-1525) | |
| 138-349, gnl|mm7|chr11 (104637305-104637515) | |
| 138-349, gnl|mm7|chr11 (104637299-104637496) | |
| 138-349, gnl|Mm7|chr11 (104637515-104637304) | |
| 138-349, gnl|monDom2|scaffold_18 (38896886-38896676) | |
| 138-349, gnl|monDom2|scaffold_18 (38896892-38896695) | |
| 138-349, gnl|oryCun1|scaffold_175869 (56529-56319) | |
| 138-349, gnl|oryCun1|scaffold_175869 (56535-56338) | |
| 138-349, gnl|panTro1|chr19 (62530653-62530456) | |
| 138-349, gnl|panTro1|chrY (9670830-9671039) | |
| 138-349, gnl|rheMac2|chr16 (57236780-57236990) | |
| 138-349, gnl|rheMac2|chr16 (57236774-57236971) | |
| 138-349, gnl|rn3|chr10 (93716375-93716585) | |
| 138-349, gnl|rn3|chr10 (93716369-93716566) | |
| 138-349, gnl|tetNig1|chrUn_random (111579785-111580004) | |
| 138-349, gnl|tetNig1|chrUn_random (111579779-111579985) | |
| 138-349, gnl|xenTro1|scaffold_221 (1384587-1384377) | |
| 138-349, gnl|xenTro1|scaffold_221 (1384593-1384396) | |
| 463-581, gnl|bosTau2|chr19 (41680670-41680787) | |
| 463-581, gnl|canFam2|chr9 (12397106-12396991) | |
| 463-581, gnl|canFam2|chr9 (12397127-12396954) | |
| 463-581, gnl|danRer3|chr3 (12570996-12571109) | |
| 463-581, gnl|danRer3|chr3 (12570974-12571114) | |
| 463-581, gnl|echTel1|scaffold_319102 (31017-31130) | |
| 463-581, gnl|echTel1|scaffold_319102 (30994-31173) | |
| 463-581, gnl|fr1|chrUn (281328067-281328174) | |
| 463-581, gnl|fr1|chrUn (281328058-281328190) | |
| 463-581, gnl|galGal2|chr27 (1311467-1311362) | |
| 463-581, gnl|galGal2|chr27 (1311504-1311315) | |
| 463-581, gnl|hg17|chr17 (42584151-42584321) | |
| 463-581, gnl|Hg17|chr17 (42584285-42584171) | |
| 463-581, gnl|hg17|chrY (10622202-10622314) | |
| 463-581, gnl|mm7|chr11 (104635093-104635208) | |
| 463-581, gnl|mm7|chr11 (104635072-104635244) | |
| 463-581, gnl|Mm7|chr11 (104635209-104635092) | |
| 463-581, gnl|monDom2|scaffold_18 (38903711-38903596) | |
| 463-581, gnl|monDom2|scaffold_18 (38903730-38903561) | |
| 463-581, gnl|oryCun1|scaffold_71713 (387-502) | |
| 463-581, gnl|oryCun1|scaffold_71713 (366-541) | |
| 463-581, gnl|panTro1|chr19 (62535772-62535602) | |
| 463-581, gnl|panTro1|chrY (9670602-9670714) | |
| 463-581, gnl|rn3|chr10 (93714090-93714205) | |
| 463-581, gnl|rn3|chr10 (93714070-93714234) | |
| 463-581, gnl|xenTro1|scaffold_221 (1386389-1386275) | |
| 463-581, gnl|xenTro1|scaffold_221 (1386410-1386269) |