Pig4-TMW8054B22
|
GGGTTGAAAAAAAGTGGGGTAAAAATTGGGGGGGGGGGGGGTAAAAAAAAATGGCCAAAA
ATTAAAACAACCCCTGTGGAATTCCCCCCCGGGCCCGTTTCCCTTGGGTTTTATTTTTAA
AAAATGGTTTTAAAAAAAAATAGCCCGGGGGAAAATTTTTTTTTTAAACCCACCAAATTT
TTTTGGGGGGGGTTAAACCCTTTAATCTTTGGGGGTCCAAGTTGTGTTTTTAATTTTGGG
CCCTTTTTCCCGGGGGAAAAGTTTCCCCTTTTTTTATTATTTTTGTAAAAAGGTTTGGGG
GATTAATGGTTTTTAAAAATTTGTATTTTTTTTTTTTTAAAAGGGGGGTAAAAGTTTTTC
CTTTTTAAATAAAAATTTTTTTTTGGGGTTTaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaaaaaaaaaaaaggaaaaaaaaaaaaaagaaaaaaaggaaaaaaaaaaa
aaaaagaaaaTCCAGGACTCACCACCACCCACTTCATCCTGCTTCCTCCCCATCAAATCC
TGCCACCTGGGACCTGTCCTCCAGCCTAGTGTGGGAGGAGTGGGGCAGAGAGGAGTGGAG
GAAGCAGGGGGCAGGGATGGGGCCGATGCCCTGACGTTGGTGGAGGGACCCCTGTGCAGC
TGGGGTGGTGGGGGCCCTCCCCATCCAACCCCCATAACTGGAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGGTTGAAAAAAAGTGGGGTAAAAATTGGGGGGGGGGGGGGTAAAAAAAAATGGCCAAAA
ATTAAAACAACCCCTGTGGAATTCCCCCCCGGGCCCGTTTCCCTTGGGTTTTATTTTTAA
AAAATGGTTTTAAAAAAAAATAGCCCGGGGGAAAATTTTTTTTTTAAACCCACCAAATTT
TTTTGGGGGGGGTTAAACCCTTTAATCTTTGGGGGTCCAAGTTGTGTTTTTAATTTTGGG
CCCTTTTTCCCGGGGGAAAAGTTTCCCCTTTTTTTATTATTTTTGTAAAAAGGTTTGGGG
GATTAATGGTTTTTAAAAATTTGTATTTTTTTTTTTTTAAAAGGGGGGTAAAAGTTTTTC
CTTTTTAAATAAAAATTTTTTTTTGGGGTTTaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaaaaaaaaaaaaggaaaaaaaaaaaaaagaaaaaaaggaaaaaaaaaaa
aaaaagaaaaTCCAGGACTCACCACCACCCACTTCATCCTGCTTCCTCCCCATCAAATCC
TGCCACCTGGGACCTGTCCTCCAGCCTAGTGTGGGAGGAGTGGGGCAGAGAGGAGTGGAG
GAAGCAGGGGGCAGGGATGGGGCCGATGCCCTGACGTTGGTGGAGGGACCCCTGTGCAGC
TGGGGTGGTGGGGGCCCTCCCCATCCAACCCCCATAACTGGAAAAA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
529-623, - strand, RNAmicro p=0.999277 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
529-623, - strand, RNAmicro p=0.999277 |
|
422-706, gnl|bosTau2|chr18 (44825445-44825165) |
|
422-706, gnl|canFam2|chr1 (115152852-115152571) |
|
422-706, gnl|dasNov1|scaffold_123512 (2575-2822) |
|
422-706, gnl|echTel1|scaffold_278771 (10123-10360) |
|
422-706, gnl|hg17|chr19 (47284250-47284510) |
|
422-706, gnl|Hg17|chr19 (47284514-47284266) |
|
422-706, gnl|mm7|chr7 (21878994-21879233) |
|
422-706, gnl|Mm7|chr7 (21879239-21879009) |
|
422-706, gnl|monDom2|scaffold_317 (125170-125436) |
|
422-706, gnl|panTro1|chr20 (44175328-44175589) |
|
422-706, gnl|rheMac2|chr19 (48401844-48402109) |
|
422-706, gnl|rn3|chr1 (80480478-80480722) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
422-706, gnl|bosTau2|chr18 (44825445-44825165) |
|
422-706, gnl|canFam2|chr1 (115152852-115152571) |
|
422-706, gnl|dasNov1|scaffold_123512 (2575-2822) |
|
422-706, gnl|echTel1|scaffold_278771 (10123-10360) |
|
422-706, gnl|hg17|chr19 (47284250-47284510) |
|
422-706, gnl|Hg17|chr19 (47284514-47284266) |
|
422-706, gnl|mm7|chr7 (21878994-21879233) |
|
422-706, gnl|Mm7|chr7 (21879239-21879009) |
|
422-706, gnl|monDom2|scaffold_317 (125170-125436) |
|
422-706, gnl|panTro1|chr20 (44175328-44175589) |
|
422-706, gnl|rheMac2|chr19 (48401844-48402109) |
|
422-706, gnl|rn3|chr1 (80480478-80480722) |
