Pig4-TMW8055I14
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATTGACCAGAGGGACAAGTATGTTGGAATTTGTGGACTCTTTGTACTGCACTTTCAGATT TTTCGAACTGTTGATAAAAAGTTTTATAAGTCTTTATTGGACATCTGTAAGAAGGTACCA GCCATCACTCTAACCGCTAATATTATTTGGTTTCCTGATAATTTCTTGATCCAGAAAATA CCAGCAGCTGCCAAAATGTTAGACAAAAAAAGTCTTCAAGCCATTAAAGCATACAGAGAT ACTTTCCTACAGCAGAAAGCTCAATCTCTTACCAAAGATGTACAGTCTTACTACGTCTTT GTGAGCTCATGGATGATGAAAATGGAATCTATTTTATCTAAAGAGCAGAGAATGGATAAA TTTGCTGAAGACCTCACCAATAGATGTAATGTTTTTATACAGGGCTTTTTATATGCATAT AGTATTAGTACCATTATTAAAACTACAATGAATCTCTACATGTCCATGCAAAAGCCAATG ACCAAAACCTCAGTTAAGGCATTATGCAGGCTTGTTGAACTTCTCAAGGCAATAGAGCAT ATGTTCTACAGGAGAAGTATGGTTGTGGCTGATTCAGTCTCACATATAACACAGCACCTT CAACATCAGGCTCTTAATTCTATTTCTGTGGCCAAGAAAAGAGTAATTTCTGACAAAAAA TATAGTGAACAGCGTCTTGATGTGCTTTCTGCTCTAGTTTTGGCTGAAAACACTCTAAAT GGACCAAGCACAAAGCAGCGACGACTTATTGTTTCTTTGGCACTAAGTGTTGGCACACAG ATGAAAACATTTAAAGACGAAGAACTCTTTCCACTTCAGGTGGTCTTAAAAAAGCTGGAT CTTATCAGTGAACTTAGAGAAAGAGTCCAAACACAATGTGACTGTTGTTTTTTATACTGG CAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATTGACCAGAGGGACAAGTATGTTGGAATTTGTGGACTCTTTGTACTGCACTTTCAGATT TTTCGAACTGTTGATAAAAAGTTTTATAAGTCTTTATTGGACATCTGTAAGAAGGTACCA GCCATCACTCTAACCGCTAATATTATTTGGTTTCCTGATAATTTCTTGATCCAGAAAATA CCAGCAGCTGCCAAAATGTTAGACAAAAAAAGTCTTCAAGCCATTAAAGCATACAGAGAT ACTTTCCTACAGCAGAAAGCTCAATCTCTTACCAAAGATGTACAGTCTTACTACGTCTTT GTGAGCTCATGGATGATGAAAATGGAATCTATTTTATCTAAAGAGCAGAGAATGGATAAA TTTGCTGAAGACCTCACCAATAGATGTAATGTTTTTATACAGGGCTTTTTATATGCATAT AGTATTAGTACCATTATTAAAACTACAATGAATCTCTACATGTCCATGCAAAAGCCAATG ACCAAAACCTCAGTTAAGGCATTATGCAGGCTTGTTGAACTTCTCAAGGCAATAGAGCAT ATGTTCTACAGGAGAAGTATGGTTGTGGCTGATTCAGTCTCACATATAACACAGCACCTT CAACATCAGGCTCTTAATTCTATTTCTGTGGCCAAGAAAAGAGTAATTTCTGACAAAAAA TATAGTGAACAGCGTCTTGATGTGCTTTCTGCTCTAGTTTTGGCTGAAAACACTCTAAAT GGACCAAGCACAAAGCAGCGACGACTTATTGTTTCTTTGGCACTAAGTGTTGGCACACAG ATGAAAACATTTAAAGACGAAGAACTCTTTCCACTTCAGGTGGTCTTAAAAAAGCTGGAT CTTATCAGTGAACTTAGAGAAAGAGTCCAAACACAATGTGACTGTTGTTTTTTATACTGG CAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 152-271, - strand, RNAz p=0.717221 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 152-271, - strand, RNAz p=0.717221 |
| Aligned organism(s): 56 entry(ies) | More info |
| Aligned organism(s): 56 entry(ies) | Help | Less info |
| 113-275, gnl|bosTau2|chr2 (18849416-18849254) | |
| 113-275, gnl|canFam2|chr10 (36410064-36409868) | |
| 113-275, gnl|danRer3|chr25 (24318164-24317976) | |
| 113-275, gnl|dasNov1|scaffold_66510 (501-307) | |
| 113-275, gnl|echTel1|scaffold_324400 (16338-16533) | |
| 113-275, gnl|fr1|chrUn (6880164-6879987) | |
| 113-275, gnl|galGal2|chr1 (50980653-50980457) | |
| 113-275, gnl|hg17|chr12 (104023355-104023551) | |
| 113-275, gnl|Hg17|chr12 (104023372-104023534) | |
| 113-275, gnl|loxAfr1|scaffold_582 (88972-89167) | |
| 113-275, gnl|mm7|chr10 (83101866-83102053) | |
| 113-275, gnl|Mm7|chr10 (83101873-83102035) | |
| 113-275, gnl|monDom2|scaffold_34 (8105666-8105482) | |
| 113-275, gnl|oryCun1|scaffold_199776 (104941-104743) | |
| 113-275, gnl|panTro1|chr10 (106530328-106530524) | |
| 113-275, gnl|rheMac2|chr11 (106260950-106261146) | |
| 113-275, gnl|rn3|chr7 (22387492-22387302) | |
| 113-275, gnl|tetNig1|chr13 (6370750-6370564) | |
| 113-275, gnl|xenTro1|scaffold_434 (778831-779025) | |
| 390-532, gnl|bosTau2|chr2 (18839245-18839103) | |
| 390-532, gnl|canFam2|chr10 (36399623-36399452) | |
| 390-532, gnl|danRer3|chr25 (24313253-24313104) | |
| 390-532, gnl|dasNov1|scaffold_25295 (1162-1333) | |
| 390-532, gnl|echTel1|scaffold_247115 (2657-2473) | |
| 390-532, gnl|fr1|chrUn (6879662-6879489) | |
| 390-532, gnl|galGal2|chr1 (50978392-50978249) | |
| 390-532, gnl|hg17|chr12 (104034117-104034286) | |
| 390-532, gnl|Hg17|chr12 (104034122-104034260) | |
| 390-532, gnl|mm7|chr10 (83111459-83111631) | |
| 390-532, gnl|Mm7|chr10 (83111468-83111606) | |
| 390-532, gnl|monDom2|scaffold_34 (8102578-8102404) | |
| 390-532, gnl|oryCun1|scaffold_199776 (93705-93543) | |
| 390-532, gnl|panTro1|chr10 (106540952-106541121) | |
| 390-532, gnl|rheMac2|chr11 (106271976-106272145) | |
| 390-532, gnl|rn3|chr7 (22377130-22376958) | |
| 390-532, gnl|tetNig1|chr13 (6370269-6370125) | |
| 390-532, gnl|xenTro1|scaffold_434 (780568-780724) | |
| 634-783, gnl|bosTau2|chr2 (18836696-18836547) | |
| 634-783, gnl|canFam2|chr10 (36395307-36395111) | |
| 634-783, gnl|danRer3|chr25 (24310487-24310316) | |
| 634-783, gnl|dasNov1|scaffold_25295 (10889-11083) | |
| 634-783, gnl|echTel1|scaffold_164390 (1358-1550) | |
| 634-783, gnl|fr1|chrUn (6877425-6877251) | |
| 634-783, gnl|galGal2|chr1 (50976670-50976476) | |
| 634-783, gnl|hg17|chr12 (104037117-104037300) | |
| 634-783, gnl|Hg17|chr12 (104037141-104037290) | |
| 634-783, gnl|loxAfr1|scaffold_582 (105820-106012) | |
| 634-783, gnl|mm7|chr10 (83113571-83113758) | |
| 634-783, gnl|Mm7|chr10 (83113599-83113748) | |
| 634-783, gnl|monDom2|scaffold_34 (8099100-8098904) | |
| 634-783, gnl|oryCun1|scaffold_117897 (29736-29550) | |
| 634-783, gnl|panTro1|chr10 (106543947-106544135) | |
| 634-783, gnl|rheMac2|chr11 (106274944-106275127) | |
| 634-783, gnl|rn3|chr7 (22373794-22373607) | |
| 634-783, gnl|tetNig1|chr13 (6369727-6369548) | |
| 634-783, gnl|xenTro1|scaffold_434 (782719-782910) |
| Aligned organism(s): 56 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 113-275, gnl|bosTau2|chr2 (18849416-18849254) | |
| 113-275, gnl|canFam2|chr10 (36410064-36409868) | |
| 113-275, gnl|danRer3|chr25 (24318164-24317976) | |
| 113-275, gnl|dasNov1|scaffold_66510 (501-307) | |
| 113-275, gnl|echTel1|scaffold_324400 (16338-16533) | |
| 113-275, gnl|fr1|chrUn (6880164-6879987) | |
| 113-275, gnl|galGal2|chr1 (50980653-50980457) | |
| 113-275, gnl|hg17|chr12 (104023355-104023551) | |
| 113-275, gnl|Hg17|chr12 (104023372-104023534) | |
| 113-275, gnl|loxAfr1|scaffold_582 (88972-89167) | |
| 113-275, gnl|mm7|chr10 (83101866-83102053) | |
| 113-275, gnl|Mm7|chr10 (83101873-83102035) | |
| 113-275, gnl|monDom2|scaffold_34 (8105666-8105482) | |
| 113-275, gnl|oryCun1|scaffold_199776 (104941-104743) | |
| 113-275, gnl|panTro1|chr10 (106530328-106530524) | |
| 113-275, gnl|rheMac2|chr11 (106260950-106261146) | |
| 113-275, gnl|rn3|chr7 (22387492-22387302) | |
| 113-275, gnl|tetNig1|chr13 (6370750-6370564) | |
| 113-275, gnl|xenTro1|scaffold_434 (778831-779025) | |
| 390-532, gnl|bosTau2|chr2 (18839245-18839103) | |
| 390-532, gnl|canFam2|chr10 (36399623-36399452) | |
| 390-532, gnl|danRer3|chr25 (24313253-24313104) | |
| 390-532, gnl|dasNov1|scaffold_25295 (1162-1333) | |
| 390-532, gnl|echTel1|scaffold_247115 (2657-2473) | |
| 390-532, gnl|fr1|chrUn (6879662-6879489) | |
| 390-532, gnl|galGal2|chr1 (50978392-50978249) | |
| 390-532, gnl|hg17|chr12 (104034117-104034286) | |
| 390-532, gnl|Hg17|chr12 (104034122-104034260) | |
| 390-532, gnl|mm7|chr10 (83111459-83111631) | |
| 390-532, gnl|Mm7|chr10 (83111468-83111606) | |
| 390-532, gnl|monDom2|scaffold_34 (8102578-8102404) | |
| 390-532, gnl|oryCun1|scaffold_199776 (93705-93543) | |
| 390-532, gnl|panTro1|chr10 (106540952-106541121) | |
| 390-532, gnl|rheMac2|chr11 (106271976-106272145) | |
| 390-532, gnl|rn3|chr7 (22377130-22376958) | |
| 390-532, gnl|tetNig1|chr13 (6370269-6370125) | |
| 390-532, gnl|xenTro1|scaffold_434 (780568-780724) | |
| 634-783, gnl|bosTau2|chr2 (18836696-18836547) | |
| 634-783, gnl|canFam2|chr10 (36395307-36395111) | |
| 634-783, gnl|danRer3|chr25 (24310487-24310316) | |
| 634-783, gnl|dasNov1|scaffold_25295 (10889-11083) | |
| 634-783, gnl|echTel1|scaffold_164390 (1358-1550) | |
| 634-783, gnl|fr1|chrUn (6877425-6877251) | |
| 634-783, gnl|galGal2|chr1 (50976670-50976476) | |
| 634-783, gnl|hg17|chr12 (104037117-104037300) | |
| 634-783, gnl|Hg17|chr12 (104037141-104037290) | |
| 634-783, gnl|loxAfr1|scaffold_582 (105820-106012) | |
| 634-783, gnl|mm7|chr10 (83113571-83113758) | |
| 634-783, gnl|Mm7|chr10 (83113599-83113748) | |
| 634-783, gnl|monDom2|scaffold_34 (8099100-8098904) | |
| 634-783, gnl|oryCun1|scaffold_117897 (29736-29550) | |
| 634-783, gnl|panTro1|chr10 (106543947-106544135) | |
| 634-783, gnl|rheMac2|chr11 (106274944-106275127) | |
| 634-783, gnl|rn3|chr7 (22373794-22373607) | |
| 634-783, gnl|tetNig1|chr13 (6369727-6369548) | |
| 634-783, gnl|xenTro1|scaffold_434 (782719-782910) |