Non-Coding RNA Search

Pig4-TMW8063L09

Sequence:


               
               TTTCCGGGATATTGATCACTTTTTTTTTGGGGCATTTGACAAAGCCCCAATGTTTCAAAT
TAGAAATATTTACCCAATATGATCAGGGCTTCCAAGCCCAGACAGGGTTTGGGAACTCTT
TTTGAAAGGGTATACTTGGAATGGGGATTGCCCATTTGTAAAATGGGGCCGGTCATTTCT
TTCATTTCAGATTGATTTGAATTTTTTCCCCATGGGTGTTGGGTTTAGGGGGTAGTAGGG
TTTTGACCCATAAATTTCAACCCTTGAGAACCTTGGGTTTGGGGAGCCCTGAAGGGGAAA
GGAAAAGAGGGCAAGTTTCAAACCCCGCAAAGGCCCTGATGGGTTGTTTGACCAAAACCC
AAAAGTGAAGTTTGGGTCCCCATTTTTTCCCCAGAAGGGGGTTTTTGGGGTTGAATAAAA
GGGCTTTTGTTGAAAAAATGGGGTTTGGGGAAAAAATTTTTGATTGATTGTTTTGGGGGT
AAACAATGGGTGTTTTTGAAAATAAACAGCCCCCCCAATaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagataaaaa

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTCCGGGATATTGATCACTTTTTTTTTGGGGCATTTGACAAAGCCCCAATGTTTCAAAT
TAGAAATATTTACCCAATATGATCAGGGCTTCCAAGCCCAGACAGGGTTTGGGAACTCTT
TTTGAAAGGGTATACTTGGAATGGGGATTGCCCATTTGTAAAATGGGGCCGGTCATTTCT
TTCATTTCAGATTGATTTGAATTTTTTCCCCATGGGTGTTGGGTTTAGGGGGTAGTAGGG
TTTTGACCCATAAATTTCAACCCTTGAGAACCTTGGGTTTGGGGAGCCCTGAAGGGGAAA
GGAAAAGAGGGCAAGTTTCAAACCCCGCAAAGGCCCTGATGGGTTGTTTGACCAAAACCC
AAAAGTGAAGTTTGGGTCCCCATTTTTTCCCCAGAAGGGGGTTTTTGGGGTTGAATAAAA
GGGCTTTTGTTGAAAAAATGGGGTTTGGGGAAAAAATTTTTGATTGATTGTTTTGGGGGT
AAACAATGGGTGTTTTTGAAAATAAACAGCCCCCCCAATaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagataaaaa

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               352-470, + strand, RNAz p=0.505595

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               352-470, + strand, RNAz p=0.505595

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of BC071768, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of BC071768, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-524, gnl|bosTau2|chr11 (25666850-25666325)
               

               
               1-524, gnl|Hg17|chr2 (54004166-54003653)
               

               
               1-524, gnl|Mm7|chr11 (30831864-30832367)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-524, gnl|bosTau2|chr11 (25666850-25666325)
               

               
               1-524, gnl|Hg17|chr2 (54004166-54003653)
               

               
               1-524, gnl|Mm7|chr11 (30831864-30832367)

	1-524, gnl\|bosTau2\|chr11 (25666850-25666325)
	1-524, gnl\|Hg17\|chr2 (54004166-54003653)
	1-524, gnl\|Mm7\|chr11 (30831864-30832367)