Non-Coding RNA Search

Pig4-TMW8067A23

Sequence:


               
               GTGAGACCCACATATACAAATATACACATGTACGCACACACTTCCAGATGTGGTTGATAA
TATTCAGATCCCGGAGTTCCCATTGTGGCTCAGCGGAAACGAATCCTCATGGTTACTAGT
CAGGTTTCTTTCTGCCGAGCCACTGCAGGAACTCCAGCCTCGCGTGTCTTTTGAGTAAGC
CCTTGGTAGAGGTTGGTTCGCAGGCATTGAGACTCAGTGCTTCCTCAGCCAGGGTGGTTC
ACTGCTGCCCTTTAGGGAAAAGAACCATGAACAACCGCAACTGTTACCAATAGACCTTTT
TTTTTTTTTTTTTTTTTAATTTTCTGTGTTTTTCAGTGTCTTATTTTGAAGGATTGGGGT
GGGGAAGTGGTAGAGGAGATGCCGAGTAAAGGCGAGAATCAGTTCTGGAGCTGGGGTACT
TGGCTTCAGGTACAAGCATCTGTCCTGAATATGTAAACAACTGCCTCACATATGAGATTT
ACTTTCCTCTCCATCTAATGAACTCCATGCCCTTCTTACTGGCAAGGAGAGCTTCTGTTT
CCACACACCTAACCAGTGTCATCCAGACGGGTGTTGGCACCACTGAAATCCCAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGAGACCCACATATACAAATATACACATGTACGCACACACTTCCAGATGTGGTTGATAA
TATTCAGATCCCGGAGTTCCCATTGTGGCTCAGCGGAAACGAATCCTCATGGTTACTAGT
CAGGTTTCTTTCTGCCGAGCCACTGCAGGAACTCCAGCCTCGCGTGTCTTTTGAGTAAGC
CCTTGGTAGAGGTTGGTTCGCAGGCATTGAGACTCAGTGCTTCCTCAGCCAGGGTGGTTC
ACTGCTGCCCTTTAGGGAAAAGAACCATGAACAACCGCAACTGTTACCAATAGACCTTTT
TTTTTTTTTTTTTTTTTAATTTTCTGTGTTTTTCAGTGTCTTATTTTGAAGGATTGGGGT
GGGGAAGTGGTAGAGGAGATGCCGAGTAAAGGCGAGAATCAGTTCTGGAGCTGGGGTACT
TGGCTTCAGGTACAAGCATCTGTCCTGAATATGTAAACAACTGCCTCACATATGAGATTT
ACTTTCCTCTCCATCTAATGAACTCCATGCCCTTCTTACTGGCAAGGAGAGCTTCTGTTT
CCACACACCTAACCAGTGTCATCCAGACGGGTGTTGGCACCACTGAAATCCCAAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               356-473, + strand, RNAz p=0.90236

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               356-473, + strand, RNAz p=0.90236

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               157-587, gnl|bosTau2|chr19 (34725902-34726314)
               

               
               157-587, gnl|Hg17|chr17 (34664734-34664338)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               157-587, gnl|bosTau2|chr19 (34725902-34726314)
               

               
               157-587, gnl|Hg17|chr17 (34664734-34664338)

	157-587, gnl\|bosTau2\|chr19 (34725902-34726314)
	157-587, gnl\|Hg17\|chr17 (34664734-34664338)