Non-Coding RNA Search

Pla1-C0000023_B07

Sequence:


               
               CTTTGAACAAAATTGGTTTGGCTGAGTAGAGAACACAAAAGCATTTGGCTATTTTATAAT
TATAAATGACTCACAACCTGCATAGTTATCCCTCCAGAGATGATGCCAGAAGATGGAACA
TTTTAATTTGCCAAGGAAAGGTGTTATACATAACTAATAGTTCCTAAAATGTACCTCATA
ACGCCAAGGATATTTTAATTTTTAAAAATTTCAGGGAAATATATAGCCCTTTAAATTTCA
AAGAGTTAGTTTTCCTCTTTTTAATTATTTTGCTTCAACTGGTGAAAATTTTGTCAGTGG
ACACCGCTTGGGACATAAATGCCACAGCTTGTCTCTTATTTGGGGAAATGAGTTTTCCAG
AAGCAAATCTTACGCATGAGGTAAATGAACCATTAGACTTCTTCCATGAAATTATCCCAG
AAGAATAAATTAGGGCTATTTGTAGAGGGAACAGAGAGAATGCTGGAAGCTCAGTTGCTT
CCACAACTTATATCTGGCTTCACAGCAGCAGAGATGTGAGGTGACCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTGAACAAAATTGGTTTGGCTGAGTAGAGAACACAAAAGCATTTGGCTATTTTATAAT
TATAAATGACTCACAACCTGCATAGTTATCCCTCCAGAGATGATGCCAGAAGATGGAACA
TTTTAATTTGCCAAGGAAAGGTGTTATACATAACTAATAGTTCCTAAAATGTACCTCATA
ACGCCAAGGATATTTTAATTTTTAAAAATTTCAGGGAAATATATAGCCCTTTAAATTTCA
AAGAGTTAGTTTTCCTCTTTTTAATTATTTTGCTTCAACTGGTGAAAATTTTGTCAGTGG
ACACCGCTTGGGACATAAATGCCACAGCTTGTCTCTTATTTGGGGAAATGAGTTTTCCAG
AAGCAAATCTTACGCATGAGGTAAATGAACCATTAGACTTCTTCCATGAAATTATCCCAG
AAGAATAAATTAGGGCTATTTGTAGAGGGAACAGAGAGAATGCTGGAAGCTCAGTTGCTT
CCACAACTTATATCTGGCTTCACAGCAGCAGAGATGTGAGGTGACCC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               378-527, + strand, RNAz p=0.871684

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               378-527, + strand, RNAz p=0.871684

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               27-527, gnl|bosTau2|chr5 (11393244-11393729)
               

               
               27-527, gnl|Hg17|chr12 (90070390-90069889)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               27-527, gnl|bosTau2|chr5 (11393244-11393729)
               

               
               27-527, gnl|Hg17|chr12 (90070390-90069889)

	27-527, gnl\|bosTau2\|chr5 (11393244-11393729)
	27-527, gnl\|Hg17\|chr12 (90070390-90069889)